Suppr超能文献

通过基因表达分布的卷积实现均值和噪声的独立控制。

Independent control of mean and noise by convolution of gene expression distributions.

机构信息

Department of Bioengineering, Rice University, 6100 Main Street, Houston, TX, 77005, USA.

Department of Biosciences, Rice University, 6100 Main Street, Houston, TX, 77005, USA.

出版信息

Nat Commun. 2021 Nov 29;12(1):6957. doi: 10.1038/s41467-021-27070-5.

Abstract

Gene expression noise can reduce cellular fitness or facilitate processes such as alternative metabolism, antibiotic resistance, and differentiation. Unfortunately, efforts to study the impacts of noise have been hampered by a scaling relationship between noise and expression level from individual promoters. Here, we use theory to demonstrate that mean and noise can be controlled independently by expressing two copies of a gene from separate inducible promoters in the same cell. We engineer low and high noise inducible promoters to validate this result in Escherichia coli, and develop a model that predicts the experimental distributions. Finally, we use our method to reveal that the response of a promoter to a repressor is less sensitive with higher repressor noise and explain this result using a law from probability theory. Our approach can be applied to investigate the effects of noise on diverse biological pathways or program cellular heterogeneity for synthetic biology applications.

摘要

基因表达噪声会降低细胞适应性,或促进替代代谢、抗生素耐药性和分化等过程。遗憾的是,由于单个启动子的噪声与表达水平之间存在一种比例关系,因此研究噪声影响的工作受到了阻碍。在这里,我们利用理论证明,通过在同一个细胞中使用两个独立诱导启动子表达同一个基因,可以独立控制平均值和噪声。我们设计了低噪声和高声噪诱导启动子,在大肠杆菌中验证了这一结果,并开发了一个可以预测实验分布的模型。最后,我们使用这种方法揭示了在更高的抑制子噪声下,启动子对抑制子的反应不那么敏感,并使用概率论中的一个定律解释了这一结果。我们的方法可以应用于研究噪声对不同生物途径的影响,或者为合成生物学应用程序设计细胞异质性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8d9d/8630168/02966771f7e8/41467_2021_27070_Fig1_HTML.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验