Lin Zhichao, Huang Wenhai, Yi Yongsheng, Li Dongbing, Xie Zehua, Li Zumei, Ye Min
Department of Thoracic Surgery, Jiangmen Central Hospital, Affiliated Jiangmen Hospital of Sun Yat-sen University, Jiangmen, 529030, Guangdong, People's Republic of China.
MyGene Diagnostics Co., Ltd., Guangzhou, 510000, Guangdong, People's Republic of China.
Int J Gen Med. 2021 Nov 20;14:8541-8555. doi: 10.2147/IJGM.S340683. eCollection 2021.
The role of long noncoding RNA (LncRNA) ADAMTS9 antisense RNA 2 (ADAMTS9-AS2) is unclear in lung adenocarcinoma (LUAD). The aim of this study was to explore the relationship between ADAMTS9-AS2 and LUAD, based on The Cancer Genome Atlas (TCGA) database and bioinformatics analysis.
Various statistical methods, Kaplan-Meier method, Cox regression analysis, GSEA, and immune infiltration analysis were used to evaluate the relationship between clinical features and ADAMTS9-AS2 expression, prognostic factors, and the significant involvement of ADAMTS9-AS2 in function.
In LUAD patients, low expression of ADAMTS9-AS2 was associated with N stage (P=0.011), gender (P=0.002), number of packs smoked (P=0.024) and smoker (P<0.001). Low ADAMTS9-AS2 expression predicted a poorer overall survival (OS) (HR: 0.68; 95% CI: 0.51-0.91; P=0.01). And ADAMTS9-AS2 expression (HR: 0.626; 95% CI: 0.397-0.986; P=0.043) was independently correlated with OS in LUAD patients. Unwinding of DNA, extrinsic pathway, polo-like kinase-mediated events, cori cycle, MCM pathway, proteasome pathway, lagging strand synthesis and PCNA-dependent long patch base excision repair were differentially enriched in ADAMTS9-AS2 high expression phenotype. ADAMTS9-AS2 expression was correlated with certain immune infiltrating cells.
In LUAD patients, ADAMTS9-AS2 expression was significantly associated with poor survival and immune infiltration. ADAMTS9-AS2 may be a promising biomarker of prognosis and response to immunotherapy for LUAD.
长链非编码RNA(LncRNA)ADAMTS9反义RNA 2(ADAMTS9-AS2)在肺腺癌(LUAD)中的作用尚不清楚。本研究旨在基于癌症基因组图谱(TCGA)数据库和生物信息学分析,探讨ADAMTS9-AS2与LUAD之间的关系。
采用多种统计方法、Kaplan-Meier法、Cox回归分析、基因集富集分析(GSEA)和免疫浸润分析,评估临床特征与ADAMTS9-AS2表达、预后因素以及ADAMTS9-AS2在功能上的显著参与之间的关系。
在LUAD患者中,ADAMTS9-AS2低表达与N分期(P=0.011)、性别(P=0.002)、吸烟包年数(P=0.024)和吸烟状态(P<0.001)相关。ADAMTS9-AS2低表达预示总体生存期(OS)较差(HR:0.68;95%CI:0.51-0.91;P=0.01)。并且ADAMTS9-AS2表达(HR:0.626;95%CI:0.397-0.986;P=0.043)与LUAD患者的OS独立相关。DNA解旋、外源性途径、polo样激酶介导的事件、科里循环、微小染色体维持蛋白(MCM)途径、蛋白酶体途径、滞后链合成和增殖细胞核抗原(PCNA)依赖性长片段碱基切除修复在ADAMTS9-AS2高表达表型中差异富集。ADAMTS9-AS2表达与某些免疫浸润细胞相关。
在LUAD患者中,ADAMTS9-AS2表达与不良生存和免疫浸润显著相关。ADAMTS9-AS2可能是LUAD预后和免疫治疗反应的一个有前景的生物标志物。