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病例报告:位于非经典剪接位点的[具体基因名称未给出]中的同义突变导致外显子45跳跃。

Case Report: A Synonymous Mutation in Located at the Non-canonical Splicing Site Leading to Exon 45 Skipping.

作者信息

Jin Pengzhen, Yan Kai, Ye Shaofen, Qian Yeqing, Wu Zaigui, Wang Miaomiao, Xu Yuqing, Xu Yanfei, Dong Minyue

机构信息

Women's Hospital, School of Medicine, Zhejiang University, Hangzhou, China.

Key Laboratory of Reproductive Genetics (Zhejiang University), Ministry of Education, Hangzhou, China.

出版信息

Front Genet. 2021 Nov 19;12:772958. doi: 10.3389/fgene.2021.772958. eCollection 2021.

DOI:10.3389/fgene.2021.772958
PMID:34868260
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8640503/
Abstract

Synonymous mutations are generally considered non-pathogenic because it did not alter the amino acids of the encoded protein. Publications of the associations between synonymous mutations and abnormal splicing have increased recently, however, not much observations available described the synonymous mutations at the non-canonical splicing sites leading to abnormal splicing. In this pedigree, the proband was diagnosed Neurofibromatosis type I due to the presence of typical cafe' au lait macules and pectus carinatum. Whole-exome sequencing identified a synonymous mutation c.6795C > T (p.N2265N) of the gene which was located at the non-canonical splicing sites. Reverse transcription polymerase chain reaction followed by Sanger sequencing was carried out, and the skipping of exon 45 was observed. Therefore, the pathogenicity of the synonymous mutation c.6795C > T was confirmed. Our finding expanded the spectrum of pathogenic mutations in Neurofibromatosis type I and provided information for genetic counseling.

摘要

同义突变通常被认为是非致病性的,因为它不会改变编码蛋白质的氨基酸。然而,最近关于同义突变与异常剪接之间关联的出版物有所增加,但没有太多观察结果描述非经典剪接位点处导致异常剪接的同义突变。在这个家系中,先证者因存在典型的牛奶咖啡斑和鸡胸而被诊断为I型神经纤维瘤病。全外显子测序在该基因位于非经典剪接位点处鉴定出一个同义突变c.6795C>T(p.N2265N)。进行了逆转录聚合酶链反应,随后进行桑格测序,观察到外显子45的跳跃。因此,同义突变c.6795C>T的致病性得到了证实。我们的发现扩展了I型神经纤维瘤病致病突变的谱,并为遗传咨询提供了信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e13/8640503/1e35feeb46d6/fgene-12-772958-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e13/8640503/3945900c6f77/fgene-12-772958-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e13/8640503/da35fb4b8a93/fgene-12-772958-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e13/8640503/1e35feeb46d6/fgene-12-772958-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e13/8640503/3945900c6f77/fgene-12-772958-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e13/8640503/da35fb4b8a93/fgene-12-772958-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e13/8640503/1e35feeb46d6/fgene-12-772958-g003.jpg

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本文引用的文献

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Alternative splicing during mammalian organ development.哺乳动物器官发育过程中的可变剪接。
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A Comprehensive Analysis and Splicing Characterization of Naturally Occurring Synonymous Variants in the Gene.基因中自然发生的同义变异的综合分析与剪接特征
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A synonymous mutation results in exon skipping, loss of function and worse patient prognosis.同义突变会导致外显子跳跃、功能丧失以及患者预后更差。
与全球发育迟缓相关的新型复合杂合变异:来自一个非同义同义外显子突变的教训。
Front Mol Neurosci. 2023 Apr 28;16:1153156. doi: 10.3389/fnmol.2023.1153156. eCollection 2023.
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Novel, heterozygous, de novo pathogenic variant (c.4963delA: p.Thr1656Glnfs*42) of the NF1 gene in a Chinese family with neurofibromatosis type 1.在中国神经纤维瘤病 1 型家系中发现 NF1 基因的新型、杂合、从头致病性变异(c.4963delA:p.Thr1656Glnfs*42)。
BMC Med Genomics. 2023 Apr 24;16(1):85. doi: 10.1186/s12920-023-01514-x.
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A synonymous mutation in impacts the transcription and translation process of gene expression.同义突变影响基因表达的转录和翻译过程。
Front Immunol. 2022 Oct 19;13:987666. doi: 10.3389/fimmu.2022.987666. eCollection 2022.
iScience. 2021 Feb 12;24(3):102173. doi: 10.1016/j.isci.2021.102173. eCollection 2021 Mar 19.
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