Zhao Xing-Hua, Yue Ling, Feng Xiu-Li, Li Dan, Wu Hai-Hong
Institute of Floriculture, Liaoning Academy of Agricultural Sciences, Shenyang, China.
Mitochondrial DNA B Resour. 2021 Nov 28;6(12):3485-3486. doi: 10.1080/23802359.2021.1948363. eCollection 2021.
The complete chloroplast genome of var was assembled and subjected to phylogenetic analysis in this study. The complete chloroplast genome of var was 158,112 bp in length, containing a large single-copy region (LSC, 86,202 bp), a small single-copy region (SSC, 18,334 bp), and two inverted repeat regions (IRs, 26,788 bp). The GC content was 37.97%. A total of 130 genes were annotated, including 86 protein-coding genes, 36 tRNA and 8 rRNA genes. Phylogenetic analysis showed that var was the most related with and they formed a monophyletic group that was sister to the clade of and .
本研究组装了var的完整叶绿体基因组并进行了系统发育分析。var的完整叶绿体基因组长度为158,112 bp,包含一个大单拷贝区域(LSC,86,202 bp)、一个小单拷贝区域(SSC,18,334 bp)和两个反向重复区域(IRs,26,788 bp)。GC含量为37.97%。共注释了130个基因,包括86个蛋白质编码基因、36个tRNA基因和8个rRNA基因。系统发育分析表明,var与关系最为密切,它们形成了一个单系类群,是和进化枝的姐妹群。