Department of Hand and Foot Surgery, Huizhou Municipal Central Hospital, Huizhou 516001, China.
Department of Breast Surgery, Huizhou Municipal Central Hospital, Huizhou 516001, China.
J Diabetes Res. 2021 Dec 7;2021:7619610. doi: 10.1155/2021/7619610. eCollection 2021.
Fibroblasts are the essential cell type of skin, highly involved in the wound regeneration process. In this study, we sought to screen out the novel genes which act important roles in diabetic fibroblasts through bioinformatic methods. A total of 811 and 490 differentially expressed genes (DEGs) between diabetic and normal fibroblasts were screened out in GSE49566 and GSE78891, respectively. Furthermore, the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways involved in type 2 diabetes were retrieved from miRWalk. Consequently, the integrated bioinformatic analyses revealed the shared KEGG pathways between DEG-identified and diabetes-related pathways were functionally enriched in the MAPK signaling pathway, and the MAPKAPK3, HSPA2, TGFBR1, and p53 signaling pathways were involved. Finally, ETV4 and NPE2 were identified as the targeted transcript factors of MAPKAPK3, HSPA2, and TGFBR1. Our findings may throw novel sight in elucidating the molecular mechanisms of fibroblast pathologies in patients with diabetic wounds and targeting new factors to advance diabetic wound treatment in clinic.
成纤维细胞是皮肤的必需细胞类型,高度参与伤口再生过程。在这项研究中,我们试图通过生物信息学方法筛选出在糖尿病成纤维细胞中起重要作用的新基因。在 GSE49566 和 GSE78891 中,分别筛选出糖尿病和成纤维细胞之间的 811 个和 490 个差异表达基因(DEGs)。此外,从 miRWalk 中检索到与 2 型糖尿病相关的京都基因与基因组百科全书(KEGG)途径。因此,综合生物信息学分析显示,DEG 鉴定和糖尿病相关途径之间的共享 KEGG 途径在 MAPK 信号通路中功能富集,并且 MAPKAPK3、HSPA2、TGFBR1 和 p53 信号通路被涉及。最后,鉴定出 ETV4 和 NPE2 是 MAPKAPK3、HSPA2 和 TGFBR1 的靶向转录因子。我们的研究结果可能为阐明糖尿病患者伤口中成纤维细胞病理学的分子机制提供新的视角,并为临床推进糖尿病伤口治疗提供新的靶向因子。