Department of Biochemistry, Government Medical College Srinagar and Associated Hospitals, Srinagar, India.
Department of Clinical Biochemistry, University of Kashmir, Srinagar, India.
Pathol Oncol Res. 2021 Dec 3;27:1609826. doi: 10.3389/pore.2021.1609826. eCollection 2021.
AT-rich interactive domain-containing protein 1A (ARID1A), TP53 and programmed cell death-ligand 1 (PDL1) are involved in several protein interactions that regulate the expression of various cancer-related genes involved in the progression of the cell cycle, cell proliferation, DNA repair, and apoptosis. In addition, gene expression analysis identified some common downstream targets of ARID1A and TP53. It has been established that tumors formed by -deficient cancer cells exhibited elevated expression. However, the aberrations in these molecules have not been studied in this population especially in Gastric Cancer (GC). In this backdrop we aimed to investigate the role of the mutation and expression of , and genes in the etiopathogenesis of Gastric Cancer (GC) in the ethnic Kashmiri population (North India). The study included 103 histologically confirmed GC cases. The mutations, if any, in exon-9 of gene was analysed by Polymerase Chain Reaction (PCR) followed by Sanger sequencing. The mRNA expression of the , and genes was analysed by Quantitative real time-PCR (qRT-PCR). We identified a nonsense mutation (c.3219; C > T) in exon-9 among two GC patients (∼2.0%), which introduces a premature stop codon at protein position 1073. The mRNA expression of the and gene was significantly reduced in 25.3% and elevated in 47.6 and 39.8% of GC cases respectively with a mean fold change of 0.63, 2.93 and 2.43. The data revealed that reduced mRNA expression of and elevated mRNA expression of and was significantly associated with the high-grade and advanced stage of cancer. Our study proposes that under-expression and overexpression of and might be crucial for tumor progression with and acting synergistically.
富含 AT 的相互作用结构域蛋白 1A(ARID1A)、TP53 和程序性细胞死亡配体 1(PDL1)参与多种蛋白质相互作用,这些相互作用调节涉及细胞周期、细胞增殖、DNA 修复和细胞凋亡等多个与癌症相关基因的表达。此外,基因表达分析还确定了 ARID1A 和 TP53 的一些共同下游靶标。已经证实,-缺陷型癌细胞形成的肿瘤表现出 表达上调。然而,这些分子的异常在这个人群中特别是在胃癌(GC)中尚未得到研究。在这种背景下,我们旨在研究 ARID1A 和 TP53 基因的 突变和表达在克什米尔少数民族(印度北部)人群胃癌(GC)发病机制中的作用。该研究纳入了 103 例组织学证实的 GC 病例。通过聚合酶链反应(PCR)分析 基因外显子-9 中的任何突变,如果有,则进行 Sanger 测序。通过定量实时-PCR(qRT-PCR)分析 、 和 基因的 mRNA 表达。我们在两名 GC 患者(约 2.0%)中发现了外显子-9 中的无义突变(c.3219; C > T),该突变在蛋白位置 1073 处引入了一个提前终止密码子。在 25.3%的 GC 病例中, 基因的 mRNA 表达显著降低,在 47.6%和 39.8%的 GC 病例中升高,平均倍数变化分别为 0.63、2.93 和 2.43。数据显示, 基因的 mRNA 表达降低和 基因的 mRNA 表达升高与癌症的高级别和晚期显著相关。我们的研究表明, 表达下调和 、 表达上调可能对肿瘤进展至关重要, 与 协同作用。