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通过靶向肿瘤抑制蛋白网络对HepTH1-5作为潜在治疗剂进行计算机分析预测。

In silico analysis prediction of HepTH1-5 as a potential therapeutic agent by targeting tumour suppressor protein networks.

作者信息

Azemin Wan-Atirah, Alias Nadiawati, Ali Abdul Manaf, Shamsir Mohd Shahir

机构信息

Faculty of Bioresources and Food Industry, School of Agriculture Science and Biotechnology, Universiti Sultan Zainal Abidin, Besut, Malaysia.

Faculty of Science, Bioinformatics Research Group (BIRG), Department of Biosciences, Universiti Teknologi Malaysia, Skudai, Malaysia.

出版信息

J Biomol Struct Dyn. 2023 Mar;41(4):1141-1167. doi: 10.1080/07391102.2021.2017349. Epub 2021 Dec 22.

DOI:10.1080/07391102.2021.2017349
PMID:34935583
Abstract

Many studies reported that the activation of tumour suppressor protein, p53 induced the human hepcidin expression. However, its expression decreased when p53 was silenced in human hepatoma cells. Contrary to Tilapia hepcidin TH1-5, HepTH1-5 was previously reported to trigger the p53 activation through the molecular docking approach. The INhibitor of Growth (ING) family members are also shown to directly interact with p53 and promote cell cycle arrest, senescence, apoptosis and participate in DNA replication and DNA damage responses to suppress the tumour initiation and progression. However, the interrelation between INGs and HepTH1-5 remains unknown. Therefore, this study aims to identify the mechanism and their protein interactions using in silico approaches. The finding revealed that HepTH1-5 and its ligands had interacted mostly on hotspot residues of ING proteins which involved in histone modifications via acetylation, phosphorylation, and methylation. This proves that HepTH1-5 might implicate in an apoptosis signalling pathway and preserve the protein structure and function of INGs by reducing the perturbation of histone binding upon oxidative stress response. This study would provide theoretical guidance for the design and experimental studies to decipher the role of HepTH1-5 as a potential therapeutic agent for cancer therapy. Communicated by Ramaswamy H. Sarma.

摘要

许多研究报告称,肿瘤抑制蛋白p53的激活可诱导人铁调素的表达。然而,当p53在人肝癌细胞中沉默时,其表达会降低。与罗非鱼铁调素TH1-5相反,先前有报道称HepTH1-5通过分子对接方法触发p53的激活。生长抑制因子(ING)家族成员也被证明可直接与p53相互作用,促进细胞周期停滞、衰老、凋亡,并参与DNA复制和DNA损伤反应,以抑制肿瘤的起始和进展。然而,INGs与HepTH1-5之间的相互关系仍然未知。因此,本研究旨在使用计算机模拟方法确定其机制及其蛋白质相互作用。研究结果表明,HepTH1-5及其配体主要在ING蛋白的热点残基上相互作用,这些残基通过乙酰化、磷酸化和甲基化参与组蛋白修饰。这证明HepTH1-5可能参与细胞凋亡信号通路,并通过减少氧化应激反应时组蛋白结合的扰动来维持INGs的蛋白质结构和功能。本研究将为设计和实验研究提供理论指导,以阐明HepTH1-5作为癌症治疗潜在治疗剂的作用。由Ramaswamy H. Sarma传达。

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