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甘蔗感染(SCMV)后糖代谢物及其转运蛋白的比较分析。

Comparative Analysis of Sugar Metabolites and Their Transporters in Sugarcane Following (SCMV) Infection.

机构信息

Guangxi Key Laboratory for Sugarcane Biology & State Key Laboratory for Conservation and Utilization of Agro Bioresources, Guangxi University, Nanning 530005, China.

IRREC-IFAS, University of Florida, Fort Pierce, FL 34945, USA.

出版信息

Int J Mol Sci. 2021 Dec 17;22(24):13574. doi: 10.3390/ijms222413574.

Abstract

(SCMV) is one of the major pathogens of sugarcane. SCMV infection causes dynamic changes in plant cells, including decreased photosynthetic rate, respiration, and sugar metabolism. To understand the basics of pathogenicity mechanism, we performed transcriptome and proteomics analysis in two sugarcane genotypes (Badila: susceptible to SCMV and B-48: SCMV resistant). Using L. genome as a reference, we identified the differentially expressed genes (DEGs) and differentially expressed proteins (DEPs) that participate in sugar metabolism, transport of their metabolites, and Carbohydrate Activating enZYmes (CAZymes). Sequencing data revealed 287 DEGs directly or indirectly involved in sugar metabolism, transport, and storage, while 323 DEGs are associated with CAZymes. Significant upregulation of glucose, sucrose, fructose, starch, and SWEET-related transcripts was observed in the Badila after infection of SCMV. B-48 showed resistance against SCMV with a limited number of sugar transcripts up-regulation at the post-infection stage. For CAZymes, only glycosyltransferase (GT)1 and glycosyl hydrolase (GH)17 were upregulated in B-48. Regulation of DEGs was analyzed at the proteomics level as well. Starch, fructose, glucose, GT1, and GH17 transcripts were expressed at the post-translational level. We verified our transcriptomic results with proteomics and qPCR data. Comprehensively, this study proved that Badila upregulated sugar metabolizing and transporting transcripts and proteins, which enhance virus multiplication and infectionl.

摘要

(SCMV)是甘蔗的主要病原体之一。SCMV 感染会导致植物细胞发生动态变化,包括降低光合作用、呼吸作用和糖代谢。为了了解致病机制的基础,我们在两种甘蔗基因型(Badila:易感染 SCMV 和 B-48:SCMV 抗性)中进行了转录组和蛋白质组分析。使用 L. 基因组作为参考,我们鉴定了参与糖代谢、代谢物运输和碳水化合物激活酶(CAZymes)的差异表达基因(DEGs)和差异表达蛋白(DEPs)。测序数据显示,287 个 DEGs 直接或间接参与糖代谢、运输和储存,而 323 个 DEGs 与 CAZymes 相关。在 SCMV 感染后,Badila 中葡萄糖、蔗糖、果糖、淀粉和 SWEET 相关转录本的表达显著上调。B-48 对 SCMV 表现出抗性,感染后阶段仅有少数糖转录本上调。对于 CAZymes,只有糖基转移酶(GT)1 和糖苷水解酶(GH)17 在 B-48 中上调。还在蛋白质组学水平上分析了 DEGs 的调控。淀粉、果糖、葡萄糖、GT1 和 GH17 转录本在翻译后水平表达。我们用蛋白质组学和 qPCR 数据验证了转录组学结果。综上所述,这项研究证明了 Badila 上调了糖代谢和转运的转录本和蛋白,从而增强了病毒的繁殖和感染。

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