Lall Davinder, Miscevic Dragan, Bruder Mark, Westbrook Adam, Aucoin Marc, Moo-Young Murray, Perry Chou C
Department of Chemical Engineering, University of Waterloo, 200 University Avenue West, Waterloo, ON N2L 3G1 Canada.
Bioresour Bioprocess. 2021;8(1):122. doi: 10.1186/s40643-021-00482-3. Epub 2021 Dec 13.
Strain engineering and bioprocessing strategies were applied for biobased production of porphobilinogen (PBG) using as the cell factory. The non-native Shemin/C4 pathway was first implemented by heterologous expression of from to supply carbon flux from the natural tricarboxylic acid (TCA) pathways for PBG biosynthesis via succinyl-CoA. Metabolic strategies were then applied for carbon flux direction from the TCA pathways to the C4 pathway. To promote PBG stability and accumulation, Clustered Regularly Interspersed Short Palindromic Repeats interference (CRISPRi) was applied to repress expression and, therefore, reduce carbon flowthrough toward porphyrin biosynthesis with minimal impact to cell physiology. To further enhance PBG biosynthesis and accumulation under the -repressed genetic background, we further heterologously expressed native . Using these engineered strains for bioreactor cultivation based on ~ 30 g L glycerol, we achieved high PBG titers up to 209 mg L, representing 1.73% of the theoretical PBG yield, with improved PBG stability and accumulation. Potential biochemical, genetic, and metabolic factors limiting PBG production were systematically identified for characterization.
The online version contains supplementary material available at 10.1186/s40643-021-00482-3.
采用菌株工程和生物加工策略,以[具体菌株]作为细胞工厂进行基于生物的胆色素原(PBG)生产。首先通过从[来源]异源表达[相关基因]来实施非天然的舍敏/C4途径,以从天然三羧酸(TCA)途径提供碳通量,用于通过琥珀酰辅酶A进行PBG生物合成。然后应用代谢策略使碳通量从TCA途径转向C4途径。为促进PBG的稳定性和积累,应用成簇规律间隔短回文重复序列干扰(CRISPRi)来抑制[相关基因]表达,从而减少向卟啉生物合成的碳通量,同时对细胞生理的影响最小。为在[相关基因]抑制的遗传背景下进一步增强PBG生物合成和积累,我们进一步异源表达天然的[相关基因]。使用这些工程改造的[菌株]在基于约30 g/L甘油的生物反应器中进行培养,我们实现了高达209 mg/L的高PBG滴度,占理论PBG产量的1.73%,同时提高了PBG的稳定性和积累。系统鉴定了限制PBG生产的潜在生化、遗传和代谢因素以进行表征。
在线版本包含可在10.1186/s40643-021-00482-3获取的补充材料。