Biological Research Centre, Institute of Genetics, Eotvos Loránd Research Network, H-6726 Szeged, Hungary.
Int J Mol Sci. 2021 Dec 26;23(1):230. doi: 10.3390/ijms23010230.
DNA polymerase η (Polη) is a translesion synthesis polymerase that can bypass different DNA lesions with varying efficiency and fidelity. Its most well-known function is the error-free bypass of ultraviolet light-induced cyclobutane pyrimidine dimers. The lack of this unique ability in humans leads to the development of a cancer-predisposing disease, the variant form of . Human Polη can insert rNTPs during DNA synthesis, though with much lower efficiency than dNTPs, and it can even extend an RNA chain with ribonucleotides. We have previously shown that Mn is a specific activator of the RNA synthetic activity of yeast Polη that increases the efficiency of the reaction by several thousand-fold over Mg. In this study, our goal was to investigate the metal cofactor dependence of RNA synthesis by human Polη. We found that out of the investigated metal cations, only Mn supported robust RNA synthesis. Steady state kinetic analysis showed that Mn activated the reaction a thousand-fold compared to Mg, even during DNA damage bypass opposite 8-oxoG and TT dimer. Our results revealed a two order of magnitude higher affinity of human Polη towards ribonucleotides in the presence of Mn compared to Mg. It is noteworthy that activation occurred without lowering the base selectivity of the enzyme on undamaged templates, whereas the fidelity decreased across a TT dimer. In summary, our data strongly suggest that, like with its yeast homolog, Mn is the proper metal cofactor of hPolη during RNA chain extension, and selective metal cofactor utilization contributes to switching between its DNA and RNA synthetic activities.
DNA 聚合酶 η(Polη)是一种跨损伤合成聚合酶,能够以不同的效率和保真度绕过不同的 DNA 损伤。它最著名的功能是无差错地绕过紫外线诱导的环丁烷嘧啶二聚体。人类缺乏这种独特的能力会导致易患癌症的疾病变体的发展。人类 Polη 在 DNA 合成过程中可以插入 rNTPs,尽管效率比 dNTPs 低得多,甚至可以用核糖核苷酸延伸 RNA 链。我们之前已经表明,Mn 是酵母 Polη 的 RNA 合成活性的特异性激活剂,可使反应效率比 Mg 提高数千倍。在这项研究中,我们的目标是研究人类 Polη 的 RNA 合成的金属辅因子依赖性。我们发现,在所研究的金属阳离子中,只有 Mn 支持强大的 RNA 合成。稳态动力学分析表明,Mn 激活反应的能力是 Mg 的千倍,即使在 8-氧代鸟嘌呤和 TT 二聚体对面进行 DNA 损伤旁路时也是如此。我们的结果表明,与 Mg 相比,Mn 存在时,人类 Polη 对核糖核苷酸的亲和力高两个数量级。值得注意的是,激活发生时并未降低酶在未受损模板上的碱基选择性,而在 TT 二聚体上的保真度降低。总之,我们的数据强烈表明,与酵母同源物一样,Mn 是 hPolη 在 RNA 链延伸过程中的适当金属辅因子,而选择性金属辅因子的利用有助于在其 DNA 和 RNA 合成活性之间切换。