Pogonin Alexander E, Otlyotov Arseniy A, Minenkov Yury, Semeikin Alexander S, Zhabanov Yuriy A, Shlykov Sergey A, Girichev Georgiy V
Department of Nanomaterials and Ceramic Technology, Ivanovo State University of Chemistry and Technology, Sheremetevsky Avenue 7, 153000 Ivanovo, Russia.
Department of Physics, Ivanovo State University of Chemistry and Technology, Sheremetevsky Avenue 7, 153000 Ivanovo, Russia.
Int J Mol Sci. 2021 Dec 28;23(1):320. doi: 10.3390/ijms23010320.
The structure of a free nickel (II) octamethylporphyrin (NiOMP) molecule was determined for the first time through a combined gas-phase electron diffraction (GED) and mass spectrometry (MS) experiment, as well as through quantum chemical (QC) calculations. Density functional theory (DFT) calculations do not provide an unambiguous answer about the planarity or non-planar distortion of the NiOMP skeleton. The GED refinement in such cases is non-trivial. Several approaches to the inverse problem solution were used. The obtained results allow us to argue that the ruffling effect is manifested in the NiOMP molecule. The minimal critical distance between the central atom of the metal and nitrogen atoms of the coordination cavity that provokes ruffling distortion in metal porphyrins is about 1.96 Å.
首次通过气相电子衍射(GED)和质谱(MS)实验相结合,以及量子化学(QC)计算,确定了游离镍(II)八甲基卟啉(NiOMP)分子的结构。密度泛函理论(DFT)计算并未就NiOMP骨架的平面性或非平面畸变给出明确答案。在这种情况下,GED精修并非易事。我们采用了几种解决反问题的方法。所得结果使我们能够认为NiOMP分子中存在褶皱效应。引发金属卟啉褶皱畸变的金属中心原子与配位腔氮原子之间的最小临界距离约为1.96 Å。