Jafarzadeh Esfehani Reza, Eslahi Atieh, Beiraghi Toosi Mehran, Sadr-Nabavi Ariane, Kerachian Mohammad Amin, Asl Mohajeri Mahsa Sadat, Farjami Mahsa, Alizade Farzaneh, Mojarrad Majid
Medical Genetics Research Center, Mashhad University of Medical Sciences, Mashhad, Iran.
Department of Medical Genetics, Faculty of Medicine, Mashhad University of Medical Sciences, Mashhad, Iran.
Iran J Basic Med Sci. 2021 Sep;24(9):1190-1195. doi: 10.22038/ijbms.2021.55082.12340.
Infantile neuroaxonal degeneration (INAD) is a rare subgroup of neurodegeneration with brain iron accumulation (NBIA) disorders. This progressive disorder may develop during the early years of life. Affected individuals mostly manifest developmental delay and/or psychomotor regression as well as other neurological deficits. In the present study, we discussed 3 INAD patients diagnosed before the age of 10 by using Whole-Exome Sequencing (WES).
We evaluated 3 pediatric patients with clinical phenotypes of INAD who underwent WES. Sanger sequencing was performed for co-segregation analysis of the variants in the families. An study was conducted for identification of the molecular function of the identified genetic variants in the gene.
We detected three novel genetic variants in the PLA2G6 gene including a homozygous missense (NM_003560.2; c.1949T>C; p.Phe650Ser), a splicing (NM_001349864; c.1266-1G>A) and a frameshift variant (NM_003560.4; c.1547_1548dupCG; p.Gly517ArgfsTer29). Since the variants were not previously reported in literature or population databases, we performed in-silico studies for these variants and demonstrated their potential pathogenicity.
The current study reports novel genetic variants in the gene in the Iranian population, emphasizing the importance of high-throughput genetic testing in rare diseases.
婴儿神经轴突营养不良(INAD)是神经退行性变伴脑铁沉积(NBIA)疾病的一个罕见亚组。这种进行性疾病可能在生命早期发病。受影响个体大多表现出发育迟缓、精神运动功能倒退以及其他神经功能缺损。在本研究中,我们使用全外显子组测序(WES)讨论了3例10岁前确诊的INAD患者。
我们评估了3例具有INAD临床表型并接受WES检测的儿科患者。对这些家庭中的变异进行桑格测序以进行共分离分析。对所鉴定基因中已鉴定的遗传变异的分子功能进行了研究。
我们在PLA2G6基因中检测到三个新的遗传变异,包括一个纯合错义变异(NM_003560.2;c.1949T>C;p.Phe650Ser)、一个剪接变异(NM_001349864;c.1266-1G>A)和一个移码变异(NM_003560.4;c.1547_1548dupCG;p.Gly517ArgfsTer29)。由于这些变异以前在文献或人群数据库中未被报道,我们对这些变异进行了计算机模拟研究,并证明了它们的潜在致病性。
本研究报告了伊朗人群中该基因的新遗传变异,强调了高通量基因检测在罕见病中的重要性。