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格列吡嗪清除自由基活性的理论研究:DFT 和分子对接研究。

Theoretical insights into the radical scavenging activity of glipizide: DFT and molecular docking studies.

机构信息

Department of Biochemistry, Amala Cancer Research Center, Amala Nagar, Thrissur, India.

Department of Physics, Sullamussalam Science College Areacode, Malappuram, India.

出版信息

Free Radic Res. 2022 Jan;56(1):53-62. doi: 10.1080/10715762.2022.2034803. Epub 2022 Feb 14.

DOI:10.1080/10715762.2022.2034803
PMID:35086396
Abstract

Glipizide is an -sulfonylurea compound used in the treatment of hyperglycemia in patients with type 2 diabetes mellitus. In the present study, DFT-based computational methods and molecular docking studies have been performed to systematically evaluate the radical scavenger behavior of the title molecule. Structural characteristics such as molecular descriptors, frontier molecular orbitals, molecular potential mapping, and Mulliken charge population have been investigated. Thermodynamic parameters like proton affinity (PA), ionization potential (IP), bond dissociation energy (BDE), electron transfer enthalpy (ETE), and proton dissociation enthalpy (PDE) related to three antiradical mechanisms namely hydrogen atom transfer (HAT), sequential electron transfer proton transfer (SETPT) and sequential proton loss electron transfer (SPLET) have been studied. Also, molecular docking studies have been carried out to have a theoretical understanding of the molecular mechanism and for the elucidation of binding mode/modes of a compound targeted through non-covalent interactions. The obtained results are of great significance in better understanding the reaction mechanism of the title molecule and opens a new perspective for the design of potent antioxidant agents.

摘要

格列吡嗪是一种用于治疗 2 型糖尿病患者高血糖的磺酰脲类化合物。在本研究中,采用基于密度泛函理论的计算方法和分子对接研究,系统地评估了标题分子的自由基清除行为。研究了分子描述符、前沿分子轨道、分子势能映射和 Mulliken 电荷分布等结构特征。还研究了与三种抗氧化机制(即氢原子转移(HAT)、顺序电子转移质子转移(SETPT)和顺序质子损失电子转移(SPLET))相关的热力学参数,如质子亲和力(PA)、电离能(IP)、键离解能(BDE)、电子转移焓(ETE)和质子离解焓(PDE)。此外,还进行了分子对接研究,以从理论上理解分子机制,并阐明通过非共价相互作用靶向的化合物的结合模式/模式。这些结果对于更好地理解标题分子的反应机制具有重要意义,并为设计有效的抗氧化剂开辟了新的视角。

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