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辅助结构域含有的从伯克霍尔德氏菌属细菌的 PET 水解酶的结构与功能特征。

Structural and functional characterization of an auxiliary domain-containing PET hydrolase from Burkholderiales bacterium.

机构信息

School of Life Sciences, BK21 FOUR KNU Creative BioResearch Group, Kyungpook National University, Daegu 41566, Republic of Korea; KNU Institute for Microorganisms, Kyungpook National University, Daegu 41566, Republic of Korea.

School of Life Sciences, BK21 FOUR KNU Creative BioResearch Group, Kyungpook National University, Daegu 41566, Republic of Korea.

出版信息

J Hazard Mater. 2022 May 5;429:128267. doi: 10.1016/j.jhazmat.2022.128267. Epub 2022 Jan 12.

Abstract

Biodegradation of polyethylene terephthalate (PET) is one of fundamental ways to solve plastic pollution. As various microbial hydrolases have an extra domain unlike PETase from Ideonella sakaiensis (IsPETase), research on the role of these extra domain in PET hydrolysis is crucial for the identification and selection of a novel PET hydrolase. Here, we report that a PET hydrolase from Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 (BbPETase) with an additional N-terminal domain (BbPETase) shows a similar hydrolysis activity toward microcrystalline PET and a higher thermal stability than IsPETase. Based on detailed structural comparisons between BbPETase and IsPETase, we generated the BbPETase variant with an enhanced PET-degrading activity and thermal stability. We further revealed that BbPETase contributes to the thermal stability of the enzyme through close contact with the core domain, but the domain might hinder the adhesion of enzyme to PET substrate. We suggest that BbPETase is an enzyme in the evolution of efficient PET degradation and molecular insight into a novel PET hydrolase provides a novel strategy for the development of biodegradation of PET.

摘要

聚对苯二甲酸乙二醇酯(PET)的生物降解是解决塑料污染的根本途径之一。由于各种微生物水解酶具有不同于 Ideonella sakaiensis(IsPETase)的 PETase 的额外结构域,因此研究这些额外结构域在 PET 水解中的作用对于鉴定和选择新型 PET 水解酶至关重要。在这里,我们报告了一种来自 Burkholderiales 细菌 RIFCSPLOWO2_02_FULL_57_36(BbPETase)的具有额外 N 端结构域(BbPETase)的 PET 水解酶,它对微晶态 PET 具有相似的水解活性,并且比 IsPETase 具有更高的热稳定性。基于 BbPETase 和 IsPETase 之间的详细结构比较,我们生成了具有增强的 PET 降解活性和热稳定性的 BbPETase 变体。我们进一步揭示了 BbPETase 通过与核心结构域的紧密接触有助于酶的热稳定性,但该结构域可能会阻碍酶与 PET 底物的粘附。我们认为,BbPETase 是高效 PET 降解进化中的一种酶,对新型 PET 水解酶的分子洞察为 PET 生物降解的发展提供了一种新策略。

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