Biomedical Innovation Department, CICESE, Zona Playitas, Ensenada, Mexico.
Methods Mol Biol. 2022;2446:71-93. doi: 10.1007/978-1-0716-2075-5_4.
The shark-derived autonomous variable antibody domains known as VNARs are attractive tools for therapeutic and diagnostic applications due to their favorable properties like small size (approximately 12 kDa), high thermal and chemical stability, and good tissue penetration. Currently, different techniques have been reported to generate VNAR domains against targets of therapeutic interest. Here, we describe methods for the preparation of an immune VNAR library based on bacteriophage display, and for the preparation of a synthetic library of VNAR domains using a modified protocol based on Kunkel mutagenesis. Finally, we describe procedures for in silico maturation of a VNAR using a bioinformatic approach to obtain higher affinity binders.
鲨鱼来源的自主可变抗体结构域,即 VNAR,因其具有体积小(约 12 kDa)、热稳定性和化学稳定性高、组织穿透性好等优点,成为治疗和诊断应用的有吸引力的工具。目前,已经有不同的技术被报道用于针对治疗相关靶点生成 VNAR 结构域。在这里,我们描述了基于噬菌体展示制备免疫 VNAR 文库的方法,以及使用基于 Kunkel 诱变的改良方案制备合成 VNAR 文库的方法。最后,我们描述了使用生物信息学方法进行 VNAR 体外成熟的程序,以获得更高亲和力的结合物。