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澳大利亚布拉福德牛引入南美洲的过程:种群结构配置与遗传多样性演变

Process of Introduction of Australian Braford Cattle to South America: Configuration of Population Structure and Genetic Diversity Evolution.

作者信息

González Araceli Rocío Marisel, Navas González Francisco Javier, Crudeli Gustavo Ángel, Delgado Bermejo Juan Vicente, Camacho Vallejo María Esperanza, Quirino Celia Raquel

机构信息

Laboratory of Animal Reproduction and Genetic Improvement, Northern Rio de Janeiro State University (Universidade Estadual do Norte Fluminense/UENF), Campos dos Goytacazes, Rio de Janeiro 28013-602, Brazil.

Institute of Agricultural Research and Training (IFAPA), Alameda del Obispo, 14014 Córdoba, Spain.

出版信息

Animals (Basel). 2022 Jan 23;12(3):275. doi: 10.3390/ani12030275.

Abstract

This study analyzes the evolution of the population structure and genetic diversity of Braford cattle in South America from 1949 to 2019 to suggest effective strategies for breeding in the future. The percentage of bulls historically increased. The average generational interval decreased to 11.78 years for the current population. Average inbreeding (F) and coancestry (C) are low and show a historically increasing trend (0.001% to 0.002%, respectively). The degree of nonrandom mating (α) increased from -0.0001 to 0.0001 denoting a change in the trend to mate similar individuals. The average relatedness coefficient (ΔR) increased in the current period from 0.002% to 0.004%. A single ancestor explained 4.55% to 7.22% of the population's gene pool. While the effective population size based on the individual inbreeding rate (NeFi) was 462.963, when based on the individual coancestry rate (NeCi), it was 420.168. Genetic diversity loss is small and mainly ascribed to bottlenecks (0.12%) and to unequal contributions of the founders (0.02%). Even if adequate levels of diversity can be found, practices that consider the overuse of individual bulls (conditioned by nature or not), could lead to a long-term reduction in diversity. The present results permit tailoring genetic management strategies that are perfectly adapted to the needs that the population demands internationally.

摘要

本研究分析了1949年至2019年南美布拉福德牛种群结构的演变和遗传多样性,以提出未来有效的育种策略。历史上公牛的比例有所增加。当前种群的平均世代间隔降至11.78年。平均近亲繁殖系数(F)和共同祖先系数(C)较低,且呈历史上升趋势(分别从0.001%升至0.002%)。非随机交配程度(α)从-0.0001增至0.0001,表明与相似个体交配的趋势发生了变化。当前时期平均亲缘系数(ΔR)从0.002%增至0.004%。单一祖先解释了种群基因库的4.55%至7.22%。基于个体近亲繁殖率的有效种群大小(NeFi)为462.963,而基于个体共同祖先率的有效种群大小(NeCi)为420.168。遗传多样性损失较小,主要归因于瓶颈效应(0.12%)和奠基者贡献不均(0.02%)。即使能发现足够水平的多样性,考虑过度使用个体公牛(无论是否受自然条件限制)的做法可能会导致多样性的长期减少。目前的结果有助于制定完全适应国际种群需求的遗传管理策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/058b/8833419/a00c06fe7bb3/animals-12-00275-g001.jpg

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