• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

源自印度-太平洋深海热液喷口的 provannid 蜗牛内共生体的全球 16S rRNA 多样性。

Global 16S rRNA diversity of provannid snail endosymbionts from Indo-Pacific deep-sea hydrothermal vents.

机构信息

Graduate School of Oceanography, University of Rhode Island, Narragansett, RI, USA.

CNRS UMR 7144 'Adaptation et Diversité en Milieux Marins' (AD2M), Team 'Dynamique de la Diversité Marine' (DyDiv), Station Biologique de Roscoff, Roscoff, France.

出版信息

Environ Microbiol Rep. 2022 Apr;14(2):299-307. doi: 10.1111/1758-2229.13051. Epub 2022 Feb 15.

DOI:10.1111/1758-2229.13051
PMID:35170217
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9303550/
Abstract

Symbioses between invertebrate animals and chemosynthetic bacteria build the foundation of deep-sea hydrothermal ecosystems worldwide. Despite the importance of these symbioses for ecosystem functioning, the diversity of symbionts within and between host organisms and geographic regions is still poorly understood. In this study we used 16S rRNA amplicon sequencing to determine the diversity of gill endosymbionts in provannid snails of the genera Alviniconcha and Ifremeria, which are key species at deep-sea hydrothermal vents in the Indo-Pacific Ocean. Our analysis of 761 snail samples across the distributional range of these species confirms previous findings that symbiont lineages are strongly partitioned by host species and broad-scale geography. Less structuring was observed within geographic regions, probably due to insufficient strain resolution of the 16S rRNA gene. Symbiont richness in individual hosts appeared to be unrelated to host size, suggesting that provannid snails might acquire their symbionts only during a permissive time window in early developmental stages in contrast to other vent molluscs that obtain their symbionts throughout their lifetime. Despite the extent of our dataset, symbiont accumulation curves did not reach saturation, highlighting the need for increased sampling efforts to uncover the full diversity of symbionts within these and other hydrothermal vent species.

摘要

无脊椎动物与化学合成细菌之间的共生关系为全球深海热液生态系统奠定了基础。尽管这些共生关系对生态系统功能很重要,但宿主生物和地理区域内和之间共生体的多样性仍了解甚少。在这项研究中,我们使用 16S rRNA 扩增子测序来确定分布于印度洋-太平洋深海热液喷口的 provannid 蜗牛属(Alviniconcha 和 Ifremeria)中鳃内共生体的多样性。我们对这些物种分布范围内的 761 个蜗牛样本进行了分析,证实了先前的发现,即共生体谱系强烈地由宿主物种和大尺度地理分区所划分。在地理区域内观察到的结构较少,可能是由于 16S rRNA 基因的菌株分辨率不足。单个宿主中的共生体丰富度似乎与宿主大小无关,这表明 provannid 蜗牛可能仅在早期发育阶段的允许时间窗口中获得共生体,而与其他热液软体动物不同,后者在其整个生命周期中获得共生体。尽管我们的数据集范围很广,但共生体积累曲线并未达到饱和,这突出表明需要增加采样工作,以揭示这些和其他热液喷口物种中共生体的全部多样性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/93d19b7957b5/EMI4-14-299-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/56c78496516a/EMI4-14-299-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/7e345238edbf/EMI4-14-299-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/577cc1740592/EMI4-14-299-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/5f2d114896ed/EMI4-14-299-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/93d19b7957b5/EMI4-14-299-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/56c78496516a/EMI4-14-299-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/7e345238edbf/EMI4-14-299-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/577cc1740592/EMI4-14-299-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/5f2d114896ed/EMI4-14-299-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/121d/9303550/93d19b7957b5/EMI4-14-299-g003.jpg

相似文献

1
Global 16S rRNA diversity of provannid snail endosymbionts from Indo-Pacific deep-sea hydrothermal vents.源自印度-太平洋深海热液喷口的 provannid 蜗牛内共生体的全球 16S rRNA 多样性。
Environ Microbiol Rep. 2022 Apr;14(2):299-307. doi: 10.1111/1758-2229.13051. Epub 2022 Feb 15.
2
Endosymbionts of Metazoans Dwelling in the PACManus Hydrothermal Vent: Diversity and Potential Adaptive Features Revealed by Genome Analysis.后生动物居住在 PACManus 热液喷口的内共生体:通过基因组分析揭示的多样性和潜在的适应特征。
Appl Environ Microbiol. 2020 Oct 15;86(21). doi: 10.1128/AEM.00815-20.
3
Genome assembly of the chemosynthetic endosymbiont of the hydrothermal vent snail Alviniconcha adamantis from the Mariana Arc.热液喷口海螺 Alviniconcha adamantis 的化学共生内共生体的基因组组装来自马里亚纳弧。
G3 (Bethesda). 2022 Sep 30;12(10). doi: 10.1093/g3journal/jkac220.
4
Ecological differences among hydrothermal vent symbioses may drive contrasting patterns of symbiont population differentiation.热液喷口共生体之间的生态差异可能导致共生体种群分化的对比模式。
mSystems. 2023 Aug 31;8(4):e0028423. doi: 10.1128/msystems.00284-23. Epub 2023 Jul 26.
5
Evidence for the role of endosymbionts in regional-scale habitat partitioning by hydrothermal vent symbioses.共生体在热液喷口共生关系中的区域尺度生境分区中的作用的证据。
Proc Natl Acad Sci U S A. 2012 Nov 20;109(47):E3241-50. doi: 10.1073/pnas.1202690109. Epub 2012 Oct 22.
6
Geographical structure of endosymbiotic bacteria hosted by Bathymodiolus mussels at eastern Pacific hydrothermal vents.东太平洋热液喷口处深海贻贝所携带的内共生细菌的地理结构。
BMC Evol Biol. 2017 May 30;17(1):121. doi: 10.1186/s12862-017-0966-3.
7
Allopatric and Sympatric Drivers of Speciation in Alviniconcha Hydrothermal Vent Snails.异地和同域驱动因素对 Alviniconcha 热液喷口蜗牛物种形成的影响。
Mol Biol Evol. 2020 Dec 16;37(12):3469-3484. doi: 10.1093/molbev/msaa177.
8
Geography, not lifestyle, explains the population structure of free-living and host-associated deep-sea hydrothermal vent snail symbionts.地理因素而非生活方式解释了深海热液喷口自由生活和宿主相关贻贝类软体动物共生体的种群结构。
Microbiome. 2023 May 16;11(1):106. doi: 10.1186/s40168-023-01493-2.
9
Horizontal transmission enables flexible associations with locally adapted symbiont strains in deep-sea hydrothermal vent symbioses.水平传播使深海热液喷口共生关系能够与当地适应的共生菌株灵活关联。
Proc Natl Acad Sci U S A. 2022 Apr 5;119(14):e2115608119. doi: 10.1073/pnas.2115608119. Epub 2022 Mar 29.
10
The discovery of new deep-sea hydrothermal vent communities in the southern ocean and implications for biogeography.南大洋中新深海热液喷口群落的发现及其对生物地理学的意义。
PLoS Biol. 2012 Jan;10(1):e1001234. doi: 10.1371/journal.pbio.1001234. Epub 2012 Jan 3.

引用本文的文献

1
The complete mitochondrial genome of the deep-sea paskentanid snail (Caenogastropoda: abyssochrysoidea) from the Carlsberg Ridge.来自卡尔斯伯格海岭的深海帕氏蜗牛(腹足纲:深海金蜗牛超科)的完整线粒体基因组。
Mitochondrial DNA B Resour. 2024 Jan 3;9(1):11-14. doi: 10.1080/23802359.2023.2298090. eCollection 2024.
2
Symbioses of alvinocaridid shrimps from the South West Pacific: No chemosymbiotic diets but conserved gut microbiomes.西南太平洋磷虾虾共生体:没有化学共生的饮食,但有保守的肠道微生物组。
Environ Microbiol Rep. 2023 Dec;15(6):614-630. doi: 10.1111/1758-2229.13201. Epub 2023 Sep 26.
3
Genomic patterns of divergence in the early and late steps of speciation of the deep-sea vent thermophilic worms of the genus Alvinella.

本文引用的文献

1
Differential patterns of connectivity in Western Pacific hydrothermal vent metapopulations: A comparison of biophysical and genetic models.西太平洋热液喷口复合种群的连通性差异模式:生物物理模型与遗传模型的比较
Evol Appl. 2021 Dec 9;16(1):22-35. doi: 10.1111/eva.13326. eCollection 2023 Jan.
2
Life in the Dark: Phylogenetic and Physiological Diversity of Chemosynthetic Symbioses.黑暗中的生命:化学合成共生关系的系统发育与生理多样性
Annu Rev Microbiol. 2021 Oct 8;75:695-718. doi: 10.1146/annurev-micro-051021-123130. Epub 2021 Aug 5.
3
Deep-sea mussels from a hybrid zone on the Mid-Atlantic Ridge host genetically indistinguishable symbionts.
深海热泉嗜热蠕虫属(Alvinella)物种形成早期和晚期分化的基因组模式。
BMC Ecol Evol. 2022 Sep 3;22(1):106. doi: 10.1186/s12862-022-02057-y.
4
Genome assembly of the chemosynthetic endosymbiont of the hydrothermal vent snail Alviniconcha adamantis from the Mariana Arc.热液喷口海螺 Alviniconcha adamantis 的化学共生内共生体的基因组组装来自马里亚纳弧。
G3 (Bethesda). 2022 Sep 30;12(10). doi: 10.1093/g3journal/jkac220.
中大西洋海脊杂交区深海贻贝拥有遗传上无法区分的共生体。
ISME J. 2021 Oct;15(10):3076-3083. doi: 10.1038/s41396-021-00927-9. Epub 2021 May 10.
4
Cladocopium community divergence in two Acropora coral hosts across multiple spatial scales.在多个空间尺度上,两种鹿角珊瑚宿主中枝状虫黄藻群落的差异。
Mol Ecol. 2020 Dec;29(23):4559-4572. doi: 10.1111/mec.15668. Epub 2020 Oct 31.
5
Allopatric and Sympatric Drivers of Speciation in Alviniconcha Hydrothermal Vent Snails.异地和同域驱动因素对 Alviniconcha 热液喷口蜗牛物种形成的影响。
Mol Biol Evol. 2020 Dec 16;37(12):3469-3484. doi: 10.1093/molbev/msaa177.
6
Classical and computed tomographic anatomical analyses in a not-so-cryptic species complex from hydrothermal vents in the SW Pacific.对西南太平洋热液喷口处一个并非十分隐秘的物种复合体进行的经典解剖学分析和计算机断层扫描解剖学分析。
Front Zool. 2020 May 7;17:12. doi: 10.1186/s12983-020-00357-x. eCollection 2020.
7
Testing hypotheses about the microbiome using the linear decomposition model (LDM).使用线性分解模型(LDM)检验关于微生物组的假设。
Bioinformatics. 2020 Aug 15;36(14):4106-4115. doi: 10.1093/bioinformatics/btaa260.
8
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era.IQ-TREE 2:基因组时代系统发育推断的新模型和有效方法。
Mol Biol Evol. 2020 May 1;37(5):1530-1534. doi: 10.1093/molbev/msaa015.
9
Shedding Light on Specificity: Population Genomic Structure of a Symbiosis Between a Coral Reef Fish and Luminous Bacterium.揭示特异性:珊瑚礁鱼类与发光细菌共生关系的群体基因组结构
Front Microbiol. 2019 Nov 19;10:2670. doi: 10.3389/fmicb.2019.02670. eCollection 2019.
10
Host-associated microbiomes drive structure and function of marine ecosystems.海洋生态系统的结构和功能由宿主相关微生物组驱动。
PLoS Biol. 2019 Nov 11;17(11):e3000533. doi: 10.1371/journal.pbio.3000533. eCollection 2019 Nov.