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感病和抗病水稻品种响应稻瘟病菌接种的无标记蛋白质组数据。

Label-free proteome data of susceptible and resistant rice cultivars in response to pv. inoculation.

作者信息

Gupta Ravi, Min Cheol Woo, Park Sang-Ryeol, Kim Sun Tae

机构信息

College of General Education, Kookmin University, Seoul 02707, Republic of Korea.

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, Republic of Korea.

出版信息

Data Brief. 2022 Feb 2;41:107890. doi: 10.1016/j.dib.2022.107890. eCollection 2022 Apr.

DOI:10.1016/j.dib.2022.107890
PMID:35198671
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8842008/
Abstract

Here we report the data associated with the article: "Comparative proteome profiling of susceptible and resistant rice cultivars identified an arginase involved in rice defense against " [1]. Bacterial blight disease caused by pv. () is one of the most devastating diseases of rice across the globe; however, the underlying molecular mechanism of rice- interaction is currently not well understood. In this manuscript, we report the proteome profiles of rice leaves generated using a label-free quantitative proteomic analysis using QExactive™ Orbitrap High-Resolution Mass Spectrometer, MapMan, and rice interactome viewer [1].

摘要

在此，我们报告与文章“对感病和抗病水稻品种的比较蛋白质组分析鉴定出一种参与水稻对[1]防御的精氨酸酶”相关的数据。由稻黄单胞菌稻致病变种（Xanthomonas oryzae pv. oryzae）引起的白叶枯病是全球水稻最具毁灭性的病害之一；然而，目前对水稻与该病菌相互作用的潜在分子机制尚不清楚。在本论文中，我们报告了使用QExactive™ 轨道阱高分辨率质谱仪、MapMan和水稻互作组浏览器通过无标记定量蛋白质组分析生成的水稻叶片蛋白质组图谱[1]。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/0788225b9f83/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/a0d520bded7b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/271b2783fdc8/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/5d8560f29b9a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/0d75f135ef89/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/0788225b9f83/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/a0d520bded7b/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/271b2783fdc8/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/5d8560f29b9a/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/0d75f135ef89/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e06c/8842008/0788225b9f83/gr5.jpg

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本文引用的文献

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Plant Physiol Biochem. 2022 Jan 15;171:105-114. doi: 10.1016/j.plaphy.2021.12.031. Epub 2021 Dec 29.
2
Label-free quantitative secretome analysis of Xanthomonas oryzae pv. oryzae highlights the involvement of a novel cysteine protease in its pathogenicity.无标记定量分泌组分析表明，稻黄单胞菌 pv. 稻致病变种中的一种新型半胱氨酸蛋白酶参与了其致病性。
J Proteomics. 2017 Oct 3;169:202-214. doi: 10.1016/j.jprot.2017.02.012. Epub 2017 Feb 21.
3
Plants (Basel). 2023 Feb 28;12(5):1079. doi: 10.3390/plants12051079.
The MaxQuant computational platform for mass spectrometry-based shotgun proteomics.
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The Perseus computational platform for comprehensive analysis of (prote)omics data.Perseus 计算平台，用于全面分析（蛋白质组学）数据。
Nat Methods. 2016 Sep;13(9):731-40. doi: 10.1038/nmeth.3901. Epub 2016 Jun 27.
5
Depletion of RuBisCO protein using the protamine sulfate precipitation method.使用硫酸鱼精蛋白沉淀法消耗核酮糖-1,5-二磷酸羧化酶/加氧酶蛋白。
Methods Mol Biol. 2015;1295:225-33. doi: 10.1007/978-1-4939-2550-6_17.
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