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应用全外显子组测序和功能注释来鉴定与马凡综合征相关的基因变异

Application of Whole Exome Sequencing and Functional Annotations to Identify Genetic Variants Associated with Marfan Syndrome.

作者信息

Lin Min-Rou, Chang Che-Mai, Ting Jafit, Chang Jan-Gowth, Chou Wan-Hsuan, Huang Kuei-Jung, Cheng Gloria, Chang Hsiao-Huang, Chang Wei-Chiao

机构信息

Department of Clinical Pharmacy, School of Pharmacy, Taipei Medical University, Taipei 110, Taiwan.

Ph.D. Program in Medical Biotechnology, College of Medical Science and Technology, Taipei Medical University, Taipei 110, Taiwan.

出版信息

J Pers Med. 2022 Feb 1;12(2):198. doi: 10.3390/jpm12020198.

Abstract

Marfan syndrome (MFS) is a rare disease that affects connective tissue, which causes abnormalities in several organ systems including the heart, eyes, bones, and joints. The autosomal dominant disorder was found to be strongly associated with , , and mutations. Although multiple genetic mutations have been reported, data from Asian populations are still limited. As a result, we utilized the whole exome sequencing (WES) technique to identify potential pathogenic variants of MFS in a Taiwan cohort. In addition, a variety of annotation databases were applied to identify the biological functions as well as the potential mechanisms of candidate genes. In this study, we confirmed the pathogenicity of to MFS. Our results indicated that and may be likely related to MFS phenotypes. Furthermore, we found nine unique variants highly shared in a MFS family cohort, of which eight are novel variants worthy of further investigation.

摘要

马凡综合征(MFS)是一种罕见的影响结缔组织的疾病,它会导致包括心脏、眼睛、骨骼和关节在内的多个器官系统出现异常。这种常染色体显性疾病被发现与 、 和 突变密切相关。尽管已经报道了多种基因突变,但来自亚洲人群的数据仍然有限。因此,我们利用全外显子组测序(WES)技术在一个台湾队列中鉴定马凡综合征的潜在致病变异。此外,还应用了各种注释数据库来确定候选基因的生物学功能以及潜在机制。在本研究中,我们证实了 对马凡综合征的致病性。我们的结果表明, 和 可能与马凡综合征的表型有关。此外,我们在一个马凡综合征家族队列中发现了九个高度共有的独特变异,其中八个是值得进一步研究的新变异。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fab5/8878617/d3259fc6b12d/jpm-12-00198-g001.jpg

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