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人类腮腺的转录组图谱单细胞分辨率解析

Transcriptomic Mapping of Human Parotid Gland at Single-Cell Resolution.

机构信息

State Key Laboratory of Oral Diseases & National Clinical Research Center for Oral Diseases, West China Hospital of Stomatology, Sichuan University, Chengdu, China.

Department of Orthodontics, West China Hospital of Stomatology, Sichuan University, Chengdu, China.

出版信息

J Dent Res. 2022 Jul;101(8):972-982. doi: 10.1177/00220345221076069. Epub 2022 Feb 26.

Abstract

As the largest salivary gland in oral cavity, the parotid gland plays an important role in initial digesting and lubricating food. The abnormal secretory function of the parotid gland can lead to dental caries and oral mucosal inflammation. In recent years, single-cell RNA sequencing (scRNA-seq) has been used to explore the heterogeneity and diversity of cells in various organs and tissues. However, the transcription profile of the human parotid gland at single-cell resolution has not been reported yet. In this study, we constructed the cell atlas of human parotid gland using the 10× Genomics platform. Characteristic gene analysis identified the biological functions of serous acinar cell populations in secreting digestive enzymes and antibacterial proteins. We revealed the specificity and similarity of the parotid gland compared to other digestive glands through comparative analyses of other published scRNA-seq data sets. We also identified the cell-specific expression of hub genes for Sjögren syndrome in the human parotid gland by integrating the results of genome-wide association studies and bulk RNA-seq, which highlighted the importance of immune cell dysfunction in parotid Sjögren syndrome pathogenesis.

摘要

作为口腔内最大的唾液腺,腮腺在初步消化和润滑食物方面发挥着重要作用。腮腺分泌功能异常可导致龋齿和口腔黏膜炎症。近年来,单细胞 RNA 测序(scRNA-seq)已被用于探索各种器官和组织中细胞的异质性和多样性。然而,人类腮腺在单细胞分辨率下的转录谱尚未被报道。在这项研究中,我们使用 10× Genomics 平台构建了人类腮腺的细胞图谱。特征基因分析确定了浆液性腺细胞群分泌消化酶和抗菌蛋白的生物学功能。我们通过比较其他已发表的 scRNA-seq 数据集,揭示了腮腺与其他消化腺的特异性和相似性。我们还通过整合全基因组关联研究和批量 RNA-seq 的结果,鉴定了人类腮腺干燥综合征的枢纽基因的细胞特异性表达,这突出了免疫细胞功能障碍在腮腺干燥综合征发病机制中的重要性。

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