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北美洲胡萝卜象甲()的种群遗传结构

Population genetic structure of the carrot weevil () in North America.

作者信息

Bessette Marianne, Ste-Croix Dave T, Brodeur Jacques, Mimee Benjamin, Gagnon Annie-Ève

机构信息

Saint-Jean-sur-Richelieu Research and Development Centre Agriculture and Agri-Food Canada Saint-Jean-sur-Richelieu QC Canada.

Département de sciences biologiques Institut de recherche en biologie végétale Université de Montréal Montreal QC Canada.

出版信息

Evol Appl. 2022 Feb 1;15(2):300-315. doi: 10.1111/eva.13343. eCollection 2022 Feb.

Abstract

Population genetic studies of insect pests enhance our ability to anticipate problems in agroecosystems, such as pest outbreaks, insecticide resistance, or expansions of the host range. This study focuses on geographic distance and host plant selection as potential determinants of genetic differentiation of the carrot weevil , a major pest of several apiaceous crops in North America. To undertake genetic studies on this species, we assembled the first complete genome sequence for . Then, we used both haplotype discrimination with mitochondrial DNA (mtDNA) and a genotyping-by-sequencing (GBS) approach to characterize the genetic population structure. A total of 220 individuals were sampled from 17 localities in the provinces of Québec, Ontario, Nova Scotia (Canada), and the state of Ohio (USA). Our results showed significant genetic differences between distant populations across North America, indicating that geographic distance represents an important factor of differentiation for the carrot weevil. Furthermore, the GBS analysis revealed more different clusters than COI analysis between Québec and Nova Scotia populations, suggesting a recent differentiation in the latter province. In contrast, we found no clear evidence of population structure associated with the four cultivated apiaceous plants tested (carrot, parsley, celery, and celeriac) using populations from Québec. This first characterization of the genetic structure of the carrot weevil contributes to a better understanding of the gene flow of the species and helps to adapt local pest management measures to better control this agricultural pest.

摘要

对害虫进行种群遗传学研究有助于我们预测农业生态系统中可能出现的问题,如害虫爆发、抗药性或寄主范围扩大等。本研究聚焦于地理距离和寄主植物选择,将其作为胡萝卜象甲遗传分化的潜在决定因素,胡萝卜象甲是北美几种伞形科作物的主要害虫。为对该物种进行遗传学研究,我们组装了其首个完整基因组序列。然后,我们使用线粒体DNA(mtDNA)单倍型鉴别和简化基因组测序(GBS)方法来表征遗传种群结构。总共从加拿大魁北克省、安大略省、新斯科舍省以及美国俄亥俄州的17个地点采集了220个个体样本。我们的研究结果表明,北美不同地区的种群之间存在显著的遗传差异,这表明地理距离是胡萝卜象甲遗传分化的一个重要因素。此外,GBS分析显示,魁北克省和新斯科舍省种群之间的聚类比细胞色素氧化酶亚基I(COI)分析更多,这表明后者省份近期出现了分化。相比之下,我们在魁北克省的种群中,没有发现与所测试的四种栽培伞形科植物(胡萝卜、欧芹、芹菜和块根芹)相关的种群结构的明确证据。对胡萝卜象甲遗传结构的首次表征有助于更好地理解该物种的基因流动,并有助于调整当地的害虫管理措施,以更好地控制这种农业害虫。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5f55/8867704/a658b3c30941/EVA-15-300-g002.jpg

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