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大肠杆菌 GH31 家族 α-木糖苷酶对木二糖寡糖的选择性水解。

Selective xyloglucan oligosaccharide hydrolysis by a GH31 α-xylosidase from Escherichia coli.

机构信息

Departamento de Bioquímica e Imunologia, Faculdade de Medicina de Ribeirão Preto, Universidade de São Paulo, Ribeirão Preto, SP, Brazil.

Departamento de Química, Faculdade de Filosofia, Ciências e Letras de Ribeirão Preto, Universidade de São Paulo, Ribeirão Preto, SP, Brazil.

出版信息

Carbohydr Polym. 2022 May 15;284:119150. doi: 10.1016/j.carbpol.2022.119150. Epub 2022 Jan 19.

Abstract

Xyloglucan is ubiquitous in the cell walls of land plants and is also an essential storage polymer in seeds of many species. We studied the hydrolysis of the non-reducing end xylosyl residue of xyloglucan oligosaccharides (XGOs) by the Escherichia coli α-xylosidase (YicI). Electrospray Ionization Tandem Mass Spectrometry (ESI-MS/MS) and ion fragmentation analysis together with high performance anion exchange chromatography with pulsed amperometric detection revealed that YicI preferentially removes the xylosyl residue from the glycosyl residue of non-galactosylated oligosaccharides. The YicI shows decreasing activity against the galactosylated oligosaccharides XXXG>XXLG≥XLXG. Studies of the XGOs interaction with active site residues by molecular dynamics simulations suggested that hydrogen bond interactions between the D49 and galactosylated oligosaccharides play an important role in enzyme-XGO interactions. This was confirmed by site-directed mutagenesis, where the D49A mutant affected catalytic efficiency against galactosylated XGOs. Our findings advance xyloglucan disassembly models and highlight the importance of YicI for biotechnology applications.

摘要

木葡聚糖普遍存在于陆地植物的细胞壁中,也是许多物种种子中必不可少的储存聚合物。我们研究了大肠杆菌α-木糖苷酶(YicI)对半乳糖化木葡聚糖寡糖(XGOs)非还原端木糖基残基的水解作用。电喷雾串联质谱(ESI-MS/MS)和离子碎裂分析以及高效阴离子交换色谱-脉冲安培检测相结合的方法表明,YicI 优先从非半乳糖化寡糖的糖基残基中去除木糖基残基。YicI 对半乳糖化寡糖的活性依次降低,表现为 XXXG>XXLG≥XLXG。通过分子动力学模拟研究 XGOs 与活性位点残基的相互作用,表明 D49 与半乳糖化寡糖之间的氢键相互作用在酶-XGO 相互作用中起着重要作用。这一点通过定点突变得到了证实,其中 D49A 突变体对半乳糖化 XGOs 的催化效率产生了影响。我们的研究结果推进了木葡聚糖的拆卸模型,并强调了 YicI 在生物技术应用中的重要性。

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