• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

白细胞毒素对趋化因子受体识别的结构见解

Structural insights into recognition of chemokine receptors by leukotoxins.

作者信息

Lambey Paul, Otun Omolade, Cong Xiaojing, Hoh François, Brunel Luc, Verdié Pascal, Grison Claire M, Peysson Fanny, Jeannot Sylvain, Durroux Thierry, Bechara Cherine, Granier Sébastien, Leyrat Cédric

机构信息

Institut de Génomique Fonctionnelle, Université de Montpellier, CNRS, INSERM, Montpellier, France.

Centre de Biochimie Structurale, CNRS UMR 5048-INSERM 1054- University of Montpellier, Montpellier, France.

出版信息

Elife. 2022 Mar 21;11:e72555. doi: 10.7554/eLife.72555.

DOI:10.7554/eLife.72555
PMID:35311641
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9005193/
Abstract

(SA) leukocidin ED (LukED) belongs to a family of bicomponent pore forming toxins that play important roles in SA immune evasion and nutrient acquisition. LukED targets specific G protein-coupled chemokine receptors to lyse human erythrocytes (red blood cells) and leukocytes (white blood cells). The first recognition step of receptors is critical for specific cell targeting and lysis. The structural and molecular bases for this mechanism are not well understood but could constitute essential information to guide antibiotic development. Here, we characterized the interaction of LukE with chemokine receptors ACKR1, CCR2, and CCR5 using a combination of structural, pharmacological, and computational approaches. First, crystal structures of LukE in complex with a small molecule mimicking sulfotyrosine side chain (p-cresyl sulfate) and with peptides containing sulfotyrosines issued from receptor sequences revealed the location of receptor sulfotyrosine binding sites in the toxins. Then, by combining previous and novel experimental data with protein docking, classical and accelerated weight histogram (AWH) molecular dynamics we propose models of the ACKR1-LukE and CCR5-LukE complexes. This work provides novel insights into chemokine receptor recognition by leukotoxins and suggests that the conserved sulfotyrosine binding pocket could be a target of choice for future drug development.

摘要

(金黄色葡萄球菌)白细胞毒素ED(LukED)属于双组分成孔毒素家族,在金黄色葡萄球菌的免疫逃逸和营养获取中发挥重要作用。LukED靶向特定的G蛋白偶联趋化因子受体,以裂解人类红细胞和白细胞。受体的首次识别步骤对于特定细胞靶向和裂解至关重要。这种机制的结构和分子基础尚不清楚,但可能构成指导抗生素开发的重要信息。在这里,我们结合结构、药理学和计算方法,对LukE与趋化因子受体ACKR1、CCR2和CCR5的相互作用进行了表征。首先,LukE与模拟磺基酪氨酸侧链的小分子(对甲酚硫酸盐)以及含有受体序列中磺基酪氨酸的肽形成的晶体结构揭示了毒素中受体磺基酪氨酸结合位点的位置。然后,通过将先前和新的实验数据与蛋白质对接、经典和加速权重直方图(AWH)分子动力学相结合,我们提出了ACKR1-LukE和CCR5-LukE复合物的模型。这项工作为白细胞毒素对趋化因子受体的识别提供了新的见解,并表明保守的磺基酪氨酸结合口袋可能是未来药物开发的首选靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/528c142acca5/elife-72555-sa2-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/83e4736bddc8/elife-72555-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/90c29f693e8e/elife-72555-fig1-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/a75a5637a937/elife-72555-fig1-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/d4ac3f8f613f/elife-72555-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/37d24ff7f191/elife-72555-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/98411c54aaa3/elife-72555-fig3-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/3e83a49a488c/elife-72555-fig3-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/0770d920d375/elife-72555-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/e72a3ef25afb/elife-72555-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/5e87b8b03c9d/elife-72555-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/3c09bcb5f3be/elife-72555-fig6-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/6327ec2fb889/elife-72555-fig6-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/6e32064c36ea/elife-72555-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/dc9e93c90bca/elife-72555-fig7-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/935d869d48ef/elife-72555-fig7-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/54584d7eaf0f/elife-72555-fig8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/11f6168ba153/elife-72555-fig8-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/390c5f979199/elife-72555-fig8-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/f4a5ace45fa6/elife-72555-fig9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/7e8866deed99/elife-72555-fig10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/6f980b1fccc1/elife-72555-sa2-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/528c142acca5/elife-72555-sa2-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/83e4736bddc8/elife-72555-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/90c29f693e8e/elife-72555-fig1-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/a75a5637a937/elife-72555-fig1-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/d4ac3f8f613f/elife-72555-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/37d24ff7f191/elife-72555-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/98411c54aaa3/elife-72555-fig3-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/3e83a49a488c/elife-72555-fig3-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/0770d920d375/elife-72555-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/e72a3ef25afb/elife-72555-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/5e87b8b03c9d/elife-72555-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/3c09bcb5f3be/elife-72555-fig6-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/6327ec2fb889/elife-72555-fig6-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/6e32064c36ea/elife-72555-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/dc9e93c90bca/elife-72555-fig7-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/935d869d48ef/elife-72555-fig7-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/54584d7eaf0f/elife-72555-fig8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/11f6168ba153/elife-72555-fig8-figsupp1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/390c5f979199/elife-72555-fig8-figsupp2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/f4a5ace45fa6/elife-72555-fig9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/7e8866deed99/elife-72555-fig10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/6f980b1fccc1/elife-72555-sa2-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b283/9005193/528c142acca5/elife-72555-sa2-fig2.jpg

相似文献

1
Structural insights into recognition of chemokine receptors by leukotoxins.白细胞毒素对趋化因子受体识别的结构见解
Elife. 2022 Mar 21;11:e72555. doi: 10.7554/eLife.72555.
2
Staphylococcus aureus Leukocidin LukED and HIV-1 gp120 Target Different Sequence Determinants on CCR5.金黄色葡萄球菌白细胞毒素LukED和HIV-1 gp120靶向CCR5上不同的序列决定簇。
mBio. 2016 Dec 13;7(6):e02024-16. doi: 10.1128/mBio.02024-16.
3
Host-Receptor Post-Translational Modifications Refine Staphylococcal Leukocidin Cytotoxicity.宿主受体翻译后修饰完善葡萄球菌白细胞毒素的细胞毒性。
Toxins (Basel). 2020 Feb 6;12(2):106. doi: 10.3390/toxins12020106.
4
Identification of a domain critical for LukED receptor targeting and lysis of erythrocytes.鉴定一个对 LukED 受体靶向和红细胞溶解至关重要的结构域。
J Biol Chem. 2020 Dec 11;295(50):17241-17250. doi: 10.1074/jbc.RA120.015757. Epub 2020 Oct 13.
5
Crystal structures of the components of the Staphylococcus aureus leukotoxin ED.金黄色葡萄球菌白细胞毒素ED各组分的晶体结构
Acta Crystallogr D Struct Biol. 2016 Jan;72(Pt 1):113-20. doi: 10.1107/S2059798315023207. Epub 2016 Jan 1.
6
Single-Chain Fragment Variables Targeting Leukocidin ED Can Alleviate the Inflammation of -Induced Mastitis in Mice.单链片段可变区靶向白细胞毒素 ED 可减轻 - 诱导的乳腺炎小鼠的炎症。
Int J Mol Sci. 2021 Dec 29;23(1):334. doi: 10.3390/ijms23010334.
7
Mucosa-Associated Invariant T Cell Hypersensitivity to Leukocidin ED and Its Modulation by Activation.粘膜相关不变 T 细胞对白细胞毒素 ED 的超敏反应及其激活调节。
J Immunol. 2022 Mar 1;208(5):1170-1179. doi: 10.4049/jimmunol.2100912. Epub 2022 Feb 9.
8
Molecular insights into mechanisms of GPCR hijacking by .分子洞察 G 蛋白偶联受体劫持的机制。
Proc Natl Acad Sci U S A. 2021 Oct 19;118(42). doi: 10.1073/pnas.2108856118.
9
Counter inhibition between leukotoxins attenuates Staphylococcus aureus virulence.白细胞毒素之间的相互抑制作用减弱了金黄色葡萄球菌的毒力。
Nat Commun. 2015 Sep 2;6:8125. doi: 10.1038/ncomms9125.
10
Antibodies to S. aureus LukS-PV Attenuated Subunit Vaccine Neutralize a Broad Spectrum of Canonical and Non-Canonical Bicomponent Leukotoxin Pairs.抗金黄色葡萄球菌LukS-PV减毒亚单位疫苗的抗体可中和多种典型和非典型双组分白细胞毒素对。
PLoS One. 2015 Sep 14;10(9):e0137874. doi: 10.1371/journal.pone.0137874. eCollection 2015.

引用本文的文献

1
The chemokine receptor CCR5: multi-faceted hook for HIV-1.趋化因子受体 CCR5:HIV-1 的多面钩。
Retrovirology. 2024 Jan 23;21(1):2. doi: 10.1186/s12977-024-00634-1.
2
Translocation of linearized full-length proteins through an engineered nanopore under opposing electrophoretic force.线性全长蛋白在相反电泳力作用下通过工程化纳米孔的转位。
Nat Biotechnol. 2024 Aug;42(8):1275-1281. doi: 10.1038/s41587-023-01954-x. Epub 2023 Sep 18.
3
Gamma-Hemolysin Components: Computational Strategies for LukF-Hlg2 Dimer Reconstruction on a Model Membrane.

本文引用的文献

1
Molecular insights into mechanisms of GPCR hijacking by .分子洞察 G 蛋白偶联受体劫持的机制。
Proc Natl Acad Sci U S A. 2021 Oct 19;118(42). doi: 10.1073/pnas.2108856118.
2
Native or Non-Native Protein-Protein Docking Models? Molecular Dynamics to the Rescue.天然或非天然蛋白质-蛋白质对接模型?分子动力学来拯救。
J Chem Theory Comput. 2021 Sep 14;17(9):5944-5954. doi: 10.1021/acs.jctc.1c00336. Epub 2021 Aug 3.
3
Identification of a domain critical for LukED receptor targeting and lysis of erythrocytes.鉴定一个对 LukED 受体靶向和红细胞溶解至关重要的结构域。
γ-溶血素组件:在模型膜上重建 LukF-Hlg2 二聚体的计算策略。
Int J Mol Sci. 2023 Apr 12;24(8):7113. doi: 10.3390/ijms24087113.
4
CHARMM-GUI : Past, Current, and Future Developments and Applications.CHARMM-GUI:过去、现在和未来的发展与应用。
J Chem Theory Comput. 2023 Apr 25;19(8):2161-2185. doi: 10.1021/acs.jctc.2c01246. Epub 2023 Apr 4.
5
Prospects for targeting ACKR1 in cancer and other diseases.靶向 ACKR1 在癌症和其他疾病中的应用前景。
Front Immunol. 2023 Mar 15;14:1111960. doi: 10.3389/fimmu.2023.1111960. eCollection 2023.
J Biol Chem. 2020 Dec 11;295(50):17241-17250. doi: 10.1074/jbc.RA120.015757. Epub 2020 Oct 13.
4
Structure-based discovery of a small-molecule inhibitor of methicillin-resistant virulence.基于结构的耐甲氧西林金黄色葡萄球菌毒力小分子抑制剂的发现
J Biol Chem. 2020 May 1;295(18):5944-5959. doi: 10.1074/jbc.RA120.012697. Epub 2020 Mar 16.
5
Host-Receptor Post-Translational Modifications Refine Staphylococcal Leukocidin Cytotoxicity.宿主受体翻译后修饰完善葡萄球菌白细胞毒素的细胞毒性。
Toxins (Basel). 2020 Feb 6;12(2):106. doi: 10.3390/toxins12020106.
6
Molecular mechanism of leukocidin GH-integrin CD11b/CD18 recognition and species specificity.白细胞毒素 GH-整合素 CD11b/CD18 识别和种属特异性的分子机制。
Proc Natl Acad Sci U S A. 2020 Jan 7;117(1):317-327. doi: 10.1073/pnas.1913690116. Epub 2019 Dec 18.
7
Staphylococcus aureus toxin LukSF dissociates from its membrane receptor target to enable renewed ligand sequestration.金黄色葡萄球菌毒素 LukSF 与其膜受体靶标解离,从而能够重新隔离配体。
FASEB J. 2019 Mar;33(3):3807-3824. doi: 10.1096/fj.201801910R. Epub 2018 Dec 3.
8
Toxins and Their Molecular Activity in Infectious Diseases.毒素及其在传染病中的分子活性。
Toxins (Basel). 2018 Jun 19;10(6):252. doi: 10.3390/toxins10060252.
9
Human CD45 is an F-component-specific receptor for the staphylococcal toxin Panton-Valentine leukocidin.人 CD45 是葡萄球菌毒素 Panton-Valentine 白细胞素的 F 成分特异性受体。
Nat Microbiol. 2018 Jun;3(6):708-717. doi: 10.1038/s41564-018-0159-x. Epub 2018 May 7.
10
Rim domain loops of staphylococcal β-pore forming bi-component toxin S-components recognize target human erythrocytes in a coordinated manner.葡萄球菌β 孔形成双组分毒素 S 组分的边缘域环以协调的方式识别靶人红细胞。
J Biochem. 2018 Aug 1;164(2):93-102. doi: 10.1093/jb/mvy030.