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4-(E)-[2-(苄氨基)苯基亚氨基甲基]-2-乙氧基苯酚的分子结构测定、光谱、量子计算研究和分子对接。

Molecular structure determination, spectroscopic, quantum computational studies and molecular docking of 4-(E)-[2-(benzylamino)phenylimino) methyl-2]ethoxy phenol.

机构信息

Department of Physics, Annamalai University, Annamalainagar, Tamil Nadu, India.

PG and Research Department of Chemistry, Jamal Mohamed College, Trichy, Tamil Nadu, India.

出版信息

J Biomol Struct Dyn. 2023 May;41(8):3574-3590. doi: 10.1080/07391102.2022.2052354. Epub 2022 Mar 23.

DOI:10.1080/07391102.2022.2052354
PMID:35318892
Abstract

A Schiff base compound 4-(E)-[2-(benzylamino)phenylimino)methyl-2]ethoxy phenol (4BPM2EP) was synthesized and spectroscopic characterization was performed using experimental methods such as FT-IR, FT-Raman and UV-Vis spectroscopy. Density functional theory (DFT/B3LYP/6-311++G(d,p)) computation was used to investigate the optimized molecular geometry, harmonic vibrational wavenumber, NMR chemical shifts, natural bond orbital (NBO) analysis, non-linear optical (NLO) properties, molecular electrostatic potential (MEP) map and Mulliken atomic charges of 4BPM2EP molecule. TD-DFT calculations have been carried out on the optimized geometry at gaseous phase, DMSO and ethanol to further understand the electronic transitions and solvents effect on the UV-Vis spectra of the compound. The assignments of vibrational modes were performed on the basis of total energy distribution (TED) using VEDA 4 program and were compared with experimental data. Molecular docking study was performed using Glide program to establish the information about the interactions between the topoisomerase DNA gyrase enzymes and the novel compound in order to explore the biological behaviour of the examined compound. The compound screened against four pathogens two gram positive, two gram negative and two fungal strains had shown good anti-bacterial and antifungal behaviour. Furthermore the compound was subjected to ADMET studies.Communicated by Ramaswamy H. Sarma.

摘要

席夫碱化合物 4-(E)-[2-(苄氨基)苯基亚氨基)甲基]-2-乙氧基苯酚(4BPM2EP)被合成,并通过实验方法如 FT-IR、FT-Raman 和 UV-Vis 光谱进行了光谱特征分析。密度泛函理论(DFT/B3LYP/6-311++G(d,p))计算用于研究优化的分子几何形状、谐振动波数、NMR 化学位移、自然键轨道(NBO)分析、非线性光学(NLO)性质、分子静电势(MEP)图和 4BPM2EP 分子的 Mulliken 原子电荷。在气相、DMSO 和乙醇中对优化的几何形状进行了 TD-DFT 计算,以进一步了解电子跃迁和溶剂对化合物紫外-可见光谱的影响。使用 VEDA 4 程序基于总能量分布(TED)进行了振动模式的分配,并与实验数据进行了比较。使用 Glide 程序进行了分子对接研究,以建立拓扑异构酶 DNA 回旋酶酶与新型化合物之间相互作用的信息,以探索所检查化合物的生物学行为。该化合物对四种病原体(两种革兰氏阳性菌、两种革兰氏阴性菌和两种真菌株)进行了筛选,表现出良好的抗细菌和抗真菌行为。此外,该化合物还进行了 ADMET 研究。由 Ramaswamy H. Sarma 传达。

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