CNC-Center for Neuroscience and Cell Biology, CIBB-Centre for Innovative Biomedicine and Biotechnology, University of Coimbra, 3004-504 Coimbra, Portugal.
Programme in Experimental Biology and Biomedicine (PDBEB), Center for Neuroscience and Cell Biology, Institute for Interdisciplinary Research, 3004-504 Coimbra, Portugal.
Int J Mol Sci. 2022 Mar 10;23(6):3009. doi: 10.3390/ijms23063009.
With the increase in life expectancy and consequent aging of the world's population, the prevalence of many neurodegenerative diseases is increasing, without concomitant improvement in diagnostics and therapeutics. These diseases share neuropathological hallmarks, including mitochondrial dysfunction. In fact, as mitochondrial alterations appear prior to neuronal cell death at an early phase of a disease's onset, the study and modulation of mitochondrial alterations have emerged as promising strategies to predict and prevent neurotoxicity and neuronal cell death before the onset of cell viability alterations. In this work, differentiated SH-SY5Y cells were treated with the mitochondrial-targeted neurotoxicants 6-hydroxydopamine and rotenone. These compounds were used at different concentrations and for different time points to understand the similarities and differences in their mechanisms of action. To accomplish this, data on mitochondrial parameters were acquired and analyzed using unsupervised (hierarchical clustering) and supervised (decision tree) machine learning methods. Both biochemical and computational analyses resulted in an evident distinction between the neurotoxic effects of 6-hydroxydopamine and rotenone, specifically for the highest concentrations of both compounds.
随着人类预期寿命的延长和世界人口的老龄化,许多神经退行性疾病的患病率正在增加,而诊断和治疗方法却没有相应的改善。这些疾病具有共同的神经病理学特征,包括线粒体功能障碍。事实上,由于线粒体改变出现在神经元细胞死亡之前,即在疾病发作的早期阶段,因此研究和调节线粒体改变已成为有前途的策略,可以在细胞活力改变之前预测和预防神经毒性和神经元细胞死亡。在这项工作中,分化的 SH-SY5Y 细胞用线粒体靶向神经毒素 6-羟多巴胺和鱼藤酮处理。这些化合物以不同的浓度和不同的时间点使用,以了解它们作用机制的相似性和差异性。为了实现这一目标,使用无监督(层次聚类)和有监督(决策树)机器学习方法获取和分析线粒体参数数据。生化和计算分析都清楚地区分了 6-羟多巴胺和鱼藤酮的神经毒性作用,特别是对于这两种化合物的最高浓度。