Synthetic Biology and Biotechnology Unit, Department of Biology, University of Padova, Viale G. Colombo 3, 35131 Padova, Italy.
Int J Mol Sci. 2022 Mar 11;23(6):3050. doi: 10.3390/ijms23063050.
Aiming at expanding the portfolio of Old Yellow Enzymes (OYEs), which have been systematically studied to be employed in the chemical and pharmaceutical industries as useful biocatalysts, we decided to explore the immense reservoir of filamentous fungi. We drew from the genome of the two Ascomycetes and four new members of the OYE superfamily belonging to the classical and thermophilic-like subfamilies. The two OYEs show wider substrate spectra than the OYE homologues, which appear as more specialized biocatalysts. According to their mesophilic origins, the new enzymes neither show high thermostability nor extreme pH optimums. The crystal structures of OYE4 and OYE8 have been determined, revealing the conserved features of the thermophilic-like subclass as well as unique properties, such as a peculiar N-terminal loop involved in dimer surface interactions. For the classical representatives OYE1 and OYE2, model structures were built and analyzed, showing surprisingly wide open access to the active site cavities due to a shorter β6-loop and a disordered capping subdomain.
为了扩展已被系统研究用于化学和制药行业的有用生物催化剂的老黄酶(OYEs)的组合,我们决定探索丝状真菌这一巨大资源库。我们从两个子囊菌的基因组中提取了属于经典和嗜热样亚科的四个新的 OYE 超家族成员。这两个 OYE 显示出比 OYE 同源物更宽的底物谱,后者表现为更专业化的生物催化剂。根据它们的嗜中性起源,新酶既没有表现出高热稳定性,也没有表现出极端的 pH 最佳值。OYE4 和 OYE8 的晶体结构已经确定,揭示了嗜热样亚科的保守特征以及独特的特性,例如涉及二聚体表面相互作用的特殊 N 端环。对于经典代表 OYE1 和 OYE2,构建和分析了模型结构,由于较短的β6-环和无序的帽状亚结构域,导致活性位点腔具有惊人的宽开放通道。