Department of Pathobiological Sciences, School of Veterinary Medicine, University of Wisconsin-Madison, Madison, WI 53706, USA.
Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo 108-0071, Japan.
Viruses. 2022 Mar 9;14(3):562. doi: 10.3390/v14030562.
Assays using ELISA measurements on serially diluted serum samples have been heavily used to measure serum reactivity to SARS-CoV-2 antigens and are widely used in virology and elsewhere in biology. We test a method using Bayesian hierarchical modelling to reduce the workload of these assays and measure reactivity of SARS-CoV-2 and HCoV antigens to human serum samples collected before and during the COVID-19 pandemic. Inflection titers for SARS-CoV-2 full-length spike protein (S1S2), spike protein receptor-binding domain (RBD), and nucleoprotein (N) inferred from 3 spread-out dilutions correlated with those inferred from 8 consecutive dilutions with an R value of 0.97 or higher. We confirm existing findings showing a small proportion of pre-pandemic human serum samples contain cross-reactive antibodies to SARS-CoV-2 S1S2 and N, and that SARS-CoV-2 infection increases serum reactivity to the beta-HCoVs OC43 and HKU1 S1S2. In serial dilution assays, large savings in resources and/or increases in throughput can be achieved by reducing the number of dilutions measured and using Bayesian hierarchical modelling to infer inflection or endpoint titers. We have released software for conducting these types of analysis.
酶联免疫吸附测定(ELISA)检测方法已广泛用于测量血清对 SARS-CoV-2 抗原的反应性,在病毒学和生物学的其他领域也有广泛应用。我们测试了一种使用贝叶斯层次模型来减少这些检测工作量并测量 SARS-CoV-2 和 HCoV 抗原与人在 COVID-19 大流行之前和期间采集的血清样本反应性的方法。从 3 个分散稀释度推断出的全长刺突蛋白(S1S2)、刺突蛋白受体结合域(RBD)和核蛋白(N)的 SARS-CoV-2 的拐点滴度与从 8 个连续稀释度推断出的拐点滴度相关,相关系数为 0.97 或更高。我们证实了现有的发现,即一小部分大流行前的人类血清样本含有对 SARS-CoV-2 S1S2 和 N 的交叉反应性抗体,并且 SARS-CoV-2 感染会增加对 beta-HCoVs OC43 和 HKU1 S1S2 的血清反应性。在连续稀释检测中,通过减少测量的稀释度并使用贝叶斯层次模型推断拐点或终点滴度,可以节省大量资源和/或提高通量。我们已经发布了用于进行此类分析的软件。