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噬菌体T7基因4蛋白和DNA聚合酶催化的RNA引发的DNA合成剖析。RNA引物与DNA合成的偶联。

Dissection of RNA-primed DNA synthesis catalyzed by gene 4 protein and DNA polymerase of bacteriophage T7. Coupling of RNA primer and DNA synthesis.

作者信息

Nakai H, Richardson C C

出版信息

J Biol Chem. 1986 Nov 15;261(32):15217-24.

PMID:3533940
Abstract

Gene 4 protein and DNA polymerase of bacteriophage T7 catalyze RNA-primed DNA synthesis on single-stranded DNA templates. T7 DNA polymerase exhibits an affinity for both gene 4 protein and single-stranded DNA, and gene 4 protein binds stably to single-stranded DNA in the presence of dTTP (Nakai, H. and Richardson, C. C. (1986) J. Biol. Chem. 261, 15208-15216). Gene 4 protein-T7 DNA polymerase-template complexes may be formed in both the presence and absence of nucleoside 5'-triphosphates. The protein-template complexes may be isolated free of unbound proteins and nucleotides by gel filtration and will catalyze RNA-primed DNA synthesis in the presence of ATP, CTP, and the four deoxynucleoside 5'-triphosphates. RNA-primed DNA synthesis may be dissected into separate reactions for primer synthesis and DNA synthesis. Upon incubation of gene 4 protein with single-stranded DNA, ATP, and CTP, a primer-template complex is formed; it is likely that gene 4 protein mediates stable binding of the oligonucleotide to the template. The complex, purified free of unbound proteins and nucleotides, supports DNA synthesis upon addition of DNA polymerase and deoxynucleoside 5'-triphosphates. Association of primers with the template is increased by the presence of dTTP or DNA polymerase during primer synthesis. DNA synthesis supported by primer-template complexes initiates predominantly at gene 4 recognition sequences, indicating that primers are bound to the template at these sites.

摘要

噬菌体T7的基因4蛋白和DNA聚合酶催化在单链DNA模板上以RNA为引物的DNA合成。T7 DNA聚合酶对基因4蛋白和单链DNA均表现出亲和力,并且在dTTP存在的情况下,基因4蛋白能稳定地结合到单链DNA上(中井,H.和理查森,C.C.(1986年)《生物化学杂志》261,15208 - 15216)。基因4蛋白 - T7 DNA聚合酶 - 模板复合物可在核苷5'-三磷酸存在或不存在的情况下形成。通过凝胶过滤可以分离出不含未结合蛋白质和核苷酸的蛋白质 - 模板复合物,并且该复合物在ATP、CTP和四种脱氧核苷5'-三磷酸存在的情况下能催化以RNA为引物的DNA合成。以RNA为引物的DNA合成可分为引物合成和DNA合成的单独反应。将基因4蛋白与单链DNA、ATP和CTP一起温育时,会形成引物 - 模板复合物;很可能基因4蛋白介导寡核苷酸与模板的稳定结合。该复合物经过纯化,不含未结合的蛋白质和核苷酸,在加入DNA聚合酶和脱氧核苷5'-三磷酸后可支持DNA合成。在引物合成过程中,dTTP或DNA聚合酶的存在会增加引物与模板的结合。引物 - 模板复合物支持的DNA合成主要在基因4识别序列处起始,这表明引物在这些位点与模板结合。

相似文献

1
Dissection of RNA-primed DNA synthesis catalyzed by gene 4 protein and DNA polymerase of bacteriophage T7. Coupling of RNA primer and DNA synthesis.噬菌体T7基因4蛋白和DNA聚合酶催化的RNA引发的DNA合成剖析。RNA引物与DNA合成的偶联。
J Biol Chem. 1986 Nov 15;261(32):15217-24.
2
Interactions of the DNA polymerase and gene 4 protein of bacteriophage T7. Protein-protein and protein-DNA interactions involved in RNA-primed DNA synthesis.噬菌体T7的DNA聚合酶与基因4蛋白的相互作用。参与RNA引发的DNA合成的蛋白质-蛋白质和蛋白质-DNA相互作用。
J Biol Chem. 1986 Nov 15;261(32):15208-16.
3
Requirements for synthesis of ribonucleic acid primers during lagging strand synthesis by the DNA polymerase and gene 4 protein of bacteriophage T7.噬菌体T7的DNA聚合酶和基因4蛋白在滞后链合成过程中合成核糖核酸引物的要求。
J Biol Chem. 1979 Oct 25;254(20):10476-82.
4
Escherichia coli thioredoxin stabilizes complexes of bacteriophage T7 DNA polymerase and primed templates.大肠杆菌硫氧还蛋白可稳定噬菌体T7 DNA聚合酶与引发模板的复合物。
J Biol Chem. 1987 Nov 25;262(33):16224-32.
5
Replication of duplex DNA by bacteriophage T7 DNA polymerase and gene 4 protein is accompanied by hydrolysis of nucleoside 5'-triphosphates.噬菌体T7 DNA聚合酶和基因4蛋白对双链DNA的复制伴随着核苷5'-三磷酸的水解。
Proc Natl Acad Sci U S A. 1977 Apr;74(4):1525-9. doi: 10.1073/pnas.74.4.1525.
6
Effects of the bacteriophage T4 gene 41 and gene 32 proteins on RNA primer synthesis: coupling of leading- and lagging-strand DNA synthesis at a replication fork.噬菌体T4基因41和基因32蛋白对RNA引物合成的影响:复制叉处前导链和滞后链DNA合成的偶联
Biochemistry. 1990 Feb 20;29(7):1791-8. doi: 10.1021/bi00459a018.
7
Mechanism of stimulation of T7 DNA polymerase by Escherichia coli single-stranded DNA binding protein (SSB).大肠杆菌单链DNA结合蛋白(SSB)对T7 DNA聚合酶的刺激机制。
J Biol Chem. 1988 Nov 15;263(32):17006-15.
8
Escherichia coli thioredoxin confers processivity on the DNA polymerase activity of the gene 5 protein of bacteriophage T7.大肠杆菌硫氧还蛋白赋予噬菌体T7基因5蛋白的DNA聚合酶活性持续合成能力。
J Biol Chem. 1987 Nov 25;262(33):16212-23.
9
Studies of the DNA helicase-RNA primase unit from bacteriophage T4. A trinucleotide sequence on the DNA template starts RNA primer synthesis.噬菌体T4的DNA解旋酶-RNA引发酶单元的研究。DNA模板上的一个三核苷酸序列启动RNA引物合成。
J Biol Chem. 1986 May 25;261(15):7001-10.
10
Characterization of the ribonucleic acid primers and the deoxyribonucleic acid product synthesized by the DNA polymerase and gene 4 protein of bacteriophage T7.噬菌体T7的DNA聚合酶和基因4蛋白合成的核糖核酸引物及脱氧核糖核酸产物的特性分析
J Biol Chem. 1979 Oct 25;254(20):10483-9.

引用本文的文献

1
Primer release is the rate-limiting event in lagging-strand synthesis mediated by the T7 replisome.引物释放是由T7复制体介导的后随链合成中的限速事件。
Proc Natl Acad Sci U S A. 2016 May 24;113(21):5916-21. doi: 10.1073/pnas.1604894113. Epub 2016 May 9.
2
A unique loop in the DNA-binding crevice of bacteriophage T7 DNA polymerase influences primer utilization.噬菌体T7 DNA聚合酶的DNA结合裂隙中的一个独特环影响引物利用。
Proc Natl Acad Sci U S A. 2000 Nov 7;97(23):12469-74. doi: 10.1073/pnas.230448397.
3
Requirement for a zinc motif for template recognition by the bacteriophage T7 primase.
噬菌体T7引发酶识别模板所需的锌基序
EMBO J. 1994 Aug 15;13(16):3909-16. doi: 10.1002/j.1460-2075.1994.tb06702.x.
4
A functional chimeric DNA primase: the Cys4 zinc-binding domain of bacteriophage T3 primase fused to the helicase of bacteriophage T7.一种功能性嵌合DNA引发酶:噬菌体T3引发酶的Cys4锌结合结构域与噬菌体T7解旋酶融合。
Proc Natl Acad Sci U S A. 1994 Dec 6;91(25):12327-31. doi: 10.1073/pnas.91.25.12327.
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A 7-kDa region of the bacteriophage T7 gene 4 protein is required for primase but not for helicase activity.噬菌体T7基因4蛋白的一个7千道尔顿区域是引发酶活性所必需的,但不是解旋酶活性所必需的。
Proc Natl Acad Sci U S A. 1988 Jan;85(2):396-400. doi: 10.1073/pnas.85.2.396.