Faculty of Arts and Sciences, Department of Physics, Zonguldak Bulent Ecevit University, Zonguldak 67100, Turkey.
Department of Molecular Medicine and USF Health Byrd Alzheimer's Research Institute, Morsani College of Medicine, University of South Florida, Tampa, Florida 33612, United States.
ACS Chem Neurosci. 2022 Apr 20;13(8):1273-1280. doi: 10.1021/acschemneuro.2c00011. Epub 2022 Mar 29.
The S59L genetic mutation of the mitochondrial coiled-coil-helix-coiled-coil-helix domain-containing protein 10 (CHCHD10) is involved in the pathogenesis of amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD). The wild-type and mutant forms of this protein contain intrinsically disordered regions, and their structural characterization has been facing challenges. Here, for the first time in the literature, we present the structural ensemble properties of the wild-type and S59L mutant form of CHCHD10 in an aqueous solution environment at the atomic level with dynamics. Even though available experiments suggested that the S59L mutation may not change the structure of the CHCHD10 protein, our structural analysis clearly shows that the structure of this protein is significantly affected by the S59L mutation. We present here the secondary structure components with their abundances per residue, the tertiary structure properties, the free energy surfaces based on the radius of gyration and end-to-end distance values, the Ramachandran plots, the quantity of intramolecular hydrogen bonds, and the principal component analysis results. These results may be crucial in designing more efficient treatment for ALS and FTD diseases.
线粒体卷曲螺旋-环-卷曲螺旋-环-卷曲螺旋结构域蛋白 10(CHCHD10)的 S59L 基因突变与肌萎缩侧索硬化症(ALS)和额颞叶痴呆(FTD)的发病机制有关。该蛋白的野生型和突变型都含有固有无序区域,其结构特征一直面临挑战。在这里,我们首次在文献中以原子水平的动力学方式展示了 CHCHD10 的野生型和 S59L 突变体在水相环境中的结构整体特性。尽管现有实验表明 S59L 突变可能不会改变 CHCHD10 蛋白的结构,但我们的结构分析清楚地表明,该蛋白的结构受到 S59L 突变的显著影响。我们在这里展示了二级结构成分及其每个残基的丰度、三级结构特性、基于回转半径和末端到末端距离值的自由能表面、Ramachandran 图、分子内氢键的数量以及主成分分析结果。这些结果对于设计更有效的 ALS 和 FTD 疾病治疗方法可能至关重要。