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中国一种观赏兼药用植物荚蒾属(忍冬科)叶绿体全基因组的特征分析

Characterization of the complete chloroplast genome of (Caprifoliaceae), an ornamental and medicinal plant in China.

作者信息

Wang Xiaoyu, He Jing, Su Xueping, Xu Bixiang, Liu Yan, Tang Yanhong, Sun Shengnan, Li Ping, Zhao Chengzhou

机构信息

Hunan Tianjin Pharmaceutical Co., Ltd., Changsha, China.

College of Horticulture, Hunan Agricultural University, Changsha, China.

出版信息

Mitochondrial DNA B Resour. 2022 Mar 28;7(3):535-536. doi: 10.1080/23802359.2022.2054376. eCollection 2022.

Abstract

In the present study, the complete chloroplast genome of is presented and characterized for the first time. The complete chloroplast genome was 156,121 bp in length, including 23,899 bp inverted repeat (IR) regions, an 89,466 bp large single-copy (LSC) region, and an 18,851 bp small single-copy (SSC) region. A total of 129 genes, including 37 tRNA genes, eight rRNA genes, and 84 protein-coding genes, were annotated, and the overall GC content of the chloroplast genome was 38.35%. Two introns in the gene and a single intron in another gene were detected. Maximum-likelihood phylogenetic analysis indicated that has a very close evolutionary relationship with , , , and . These results are valuable for studying the evolution and genetic diversity of

摘要

在本研究中,首次对[物种名称]的完整叶绿体基因组进行了呈现和特征分析。完整的叶绿体基因组长度为156,121bp,包括23,899bp的反向重复(IR)区域、89,466bp的大单拷贝(LSC)区域和18,851bp的小单拷贝(SSC)区域。共注释了129个基因,包括37个tRNA基因、8个rRNA基因和84个蛋白质编码基因,叶绿体基因组的总体GC含量为38.35%。在一个基因中检测到两个内含子,在另一个基因中检测到一个内含子。最大似然系统发育分析表明,[物种名称]与[其他物种名称1]、[其他物种名称2]、[其他物种名称3]和[其他物种名称4]具有非常密切的进化关系。这些结果对于研究[物种名称]的进化和遗传多样性具有重要价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b21f/8959524/c909b277d588/TMDN_A_2054376_F0001_C.jpg

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