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忍冬科(Caprifoliaceae)某植物完整叶绿体基因组的特征分析

Characterization of the complete chloroplast genome of (Caprifoliaceae).

作者信息

Wei Xiao-Mei, Hu Ying, Wei Kun-Hua, Wu Qing-Hua, Huang Yong, Wei Fan

机构信息

Guangxi Key Laboratory of Medicinal Resources Protection and Genetic Improvement, Guangxi Botanical Garden of Medicinal Plants, Nanning, China.

Guangxi Engineering Research Center of TCM Resource Intelligent Creation, Nanning, China.

出版信息

Mitochondrial DNA B Resour. 2021 Sep 27;6(10):3067-3069. doi: 10.1080/23802359.2021.1981161. eCollection 2021.

Abstract

The complete chloroplast genome of Hemsl. has been characterized by reference-based assembly using Illumina paired-end data. The circular complete cp genome is 155,463 bp in length, containing a large single copy (LSC) region of 89,282 bp, a small single copy (SSC) region of 18,661 bp, which are separated by a pair of inverted repeat (IR) regions of 23,760 bp. A total of 129 genes were predicted from the cp genome, including 83 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis reveals that is more closely related to Thunb. and Rehd. Our result will provide a reference for the phylogenetic relationship, plant identification and resource development and utilization of species.

摘要

通过使用Illumina双端数据进行基于参考的组装,对**[植物名称未完整给出]的完整叶绿体基因组进行了表征。环状完整叶绿体基因组长度为155,463 bp,包含一个89,282 bp的大单拷贝(LSC)区域、一个18,661 bp的小单拷贝(SSC)区域,它们被一对23,760 bp的反向重复(IR)区域隔开。从叶绿体基因组中总共预测出129个基因,包括83个蛋白质编码基因、37个tRNA基因和8个rRNA基因。系统发育分析表明,[植物名称未完整给出][植物名称未完整给出][植物名称未完整给出]关系更密切。我们的结果将为[植物名称未完整给出]**物种的系统发育关系、植物鉴定以及资源开发利用提供参考。

原文中植物名称多处未完整给出,翻译时保留了原文状态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/238d/8480604/5dffe9caaee7/TMDN_A_1981161_F0001_B.jpg

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