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婴儿血管瘤中关键微小RNA和基因的鉴定

Identification of Key microRNAs and Genes in Infantile Hemangiomas.

作者信息

Fu Cong, Yang Kun, Zou Yuqing, Huo Ran

机构信息

Department of Burn and Plastic Surgery, Shandong Provincial Hospital, Shandong First Medical University, Jinan, China.

Department of Medicine, Shandong University, Jinan, China.

出版信息

Front Genet. 2022 Mar 11;13:766561. doi: 10.3389/fgene.2022.766561. eCollection 2022.

Abstract

Infantile hemangiomas (IHs) are the most frequent vascular tumors that occur during infancy. Microribonucleic acids (miRNAs) have been demonstrated as critical regulators of gene expression in various diseases. However, the function of miRNAs in IH still remains largely unknown. In the present study, we performed a miRNA microarray analysis of IH and identified 68 differentially expressed miRNAs (DEMs). In addition, miRNA-gene networks and protein-protein interactions were constructed, and the hub miRNAs and genes of IH were screened out. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis were used for biological analysis of DEMs and differentially expressed genes (DEGs). The pathway enrichment analysis of DEMs revealed several tumor-related pathways, including proteoglycans in cancer, signaling pathway regulating pluripotency of stem cells and TGF-beta signaling pathway. DEGs were mainly enriched in biological processes, including intracellular signal transduction, cell adhesion, and cell death. KEGG pathway analysis indicated that DEGs were enriched in tumorigenesis- and angiogenesis-related pathways such as proteoglycans in cancer, MAPK signaling pathway and Rap1 signaling pathway. Collectively, this study first established a comprehensive miRNA-gene network in IH, which should provide novel insights into IH pathogenesis and be beneficial to the understanding of neovascularization-related disorders.

摘要

婴儿血管瘤(IHs)是婴儿期最常见的血管肿瘤。微小核糖核酸(miRNAs)已被证明是多种疾病中基因表达的关键调节因子。然而,miRNAs在IH中的功能仍 largely未知。在本研究中,我们对IH进行了miRNA微阵列分析,鉴定出68个差异表达的miRNAs(DEMs)。此外,构建了miRNA-基因网络和蛋白质-蛋白质相互作用网络,并筛选出了IH的关键miRNAs和基因。利用基因本体论(GO)和京都基因与基因组百科全书(KEGG)通路分析对DEMs和差异表达基因(DEGs)进行生物学分析。DEMs的通路富集分析揭示了几个与肿瘤相关的通路,包括癌症中的蛋白聚糖、调节干细胞多能性的信号通路和TGF-β信号通路。DEGs主要富集在生物过程中,包括细胞内信号转导、细胞粘附和细胞死亡。KEGG通路分析表明,DEGs富集在与肿瘤发生和血管生成相关的通路中,如癌症中的蛋白聚糖、MAPK信号通路和Rap1信号通路。总的来说,本研究首次在IH中建立了一个全面的miRNA-基因网络,这应该为IH的发病机制提供新的见解,并有助于理解与新生血管形成相关的疾病。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e1d5/8963821/1d41a6a7a3e6/fgene-13-766561-g001.jpg

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