• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

小头虫科和蛰龙介科(环节动物门)的首个线粒体基因组及其系统发育定位。

First mitochondrial genomes of Capitellidae and Opheliidae (Annelida) and their phylogenetic placement.

作者信息

Kobayashi Genki, Itoh Hajime, Nakajima Nobuyoshi

机构信息

Seto Marine Biological Laboratory, Field Science Education and Research Center, Kyoto University, Nishimuro, Japan.

National Institute for Environmental Studies, Tsukuba, Japan.

出版信息

Mitochondrial DNA B Resour. 2022 Apr 1;7(4):577-579. doi: 10.1080/23802359.2022.2056537. eCollection 2022.

DOI:10.1080/23802359.2022.2056537
PMID:35386629
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8979498/
Abstract

The complete mitochondrial genomes of sp. (15,776 bp) (Annelida: Capitellidae) and sp. (18,538 bp) (Annelida: Opheliidae) were assembled for the first time. A group II intron (303 bp) was found in of sp. A phylogenetic analysis revealed that sp. and sp. were monophyletic, and this clade was clustered with echiurans, although the possibility of the effect of long-branch attraction should be considered.

摘要

首次组装了 属(15,776 bp)(环节动物门: Capitellidae科)和 属(18,538 bp)(环节动物门: Opheliidae科)的完整线粒体基因组。在 属的 中发现了一个II组内含子(303 bp)。系统发育分析表明, 属和 属是单系的,并且该分支与螠虫动物聚集在一起,尽管应考虑长枝吸引效应的影响。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8acd/8979498/80cc1f3c7703/TMDN_A_2056537_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8acd/8979498/80cc1f3c7703/TMDN_A_2056537_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8acd/8979498/80cc1f3c7703/TMDN_A_2056537_F0001_C.jpg

相似文献

1
First mitochondrial genomes of Capitellidae and Opheliidae (Annelida) and their phylogenetic placement.小头虫科和蛰龙介科(环节动物门)的首个线粒体基因组及其系统发育定位。
Mitochondrial DNA B Resour. 2022 Apr 1;7(4):577-579. doi: 10.1080/23802359.2022.2056537. eCollection 2022.
2
Molecular Phylogeny of the Family Capitellidae (Annelida).蛰龙介科(环节动物门)的分子系统发育
Zoolog Sci. 2018 Oct;35(5):436-445. doi: 10.2108/zs180009.
3
Catalogue of Notomastus M. Sars, 1851 (Annelida, Capitellidae) and the description of a new species from the Gulf of California.1851年萨氏帚毛虫属(环节动物门,小头虫科)名录及一种来自加利福尼亚湾新物种的描述
Zootaxa. 2019 Apr 5;4577(2):zootaxa.4577.2.2. doi: 10.11646/zootaxa.4577.2.2.
4
Mitogenome of a stink worm (Annelida: Travisiidae) includes degenerate group II intron that is also found in five congeneric species.一个臭虫(环节动物:Travisiidae)的线粒体基因组包含退化的组 II 内含子,该内含子也存在于五个同种物种中。
Sci Rep. 2022 Mar 15;12(1):4449. doi: 10.1038/s41598-022-08103-5.
5
Abyssal fauna of polymetallic nodule exploration areas, eastern Clarion-Clipperton Zone, central Pacific Ocean: Annelida: Capitellidae, Opheliidae, Scalibregmatidae, and Travisiidae.中太平洋克拉里昂-克利珀顿区东部多金属结核勘探区域的深海动物群:环节动物门:小头虫科、蛰龙介科、标指虫科和特拉维斯虫科。
Zookeys. 2019 Oct 28;883:1-82. doi: 10.3897/zookeys.883.36193. eCollection 2019.
6
A close phylogenetic relationship between Sipuncula and Annelida evidenced from the complete mitochondrial genome sequence of Phascolosoma esculenta.基于可口革囊星虫线粒体全基因组序列揭示星虫动物与环节动物的近缘系统发生关系
BMC Genomics. 2009 Mar 28;10:136. doi: 10.1186/1471-2164-10-136.
7
A new (Annelida, Capitellidae) species from Korean waters, with genetic comparison based on three gene markers.一种来自韩国海域的新的(环节动物门, Capitellidae科)物种,并基于三种基因标记进行遗传比较。
Zookeys. 2018 May 4(754):141-155. doi: 10.3897/zookeys.754.23655. eCollection 2018.
8
A new species of (Annelida, Capitellidae) from southern China, with remarks on its morphology and distribution.来自中国南方的一种新的(环节动物门, Capitellidae科)物种,及其形态学和分布的相关论述。
Zookeys. 2020 Jul 6;946:1-16. doi: 10.3897/zookeys.946.50662. eCollection 2020.
9
New insights into polychaete phylogeny (Annelida) inferred from 18S rDNA sequences.基于18S核糖体DNA序列推断多毛纲(环节动物门)系统发育的新见解。
Mol Phylogenet Evol. 2003 Nov;29(2):279-88. doi: 10.1016/s1055-7903(03)00107-6.
10
Review of the Capitellidae (Annelida, Polychaeta) from the Eastern Tropical Pacific region, with notes on selected species.东热带太平洋地区 Capitellidae(环节动物门,多毛纲)的综述,并对选定物种进行说明。
Zookeys. 2011(151):17-52. doi: 10.3897/zookeys.151.1964. Epub 2011 Dec 3.

引用本文的文献

1
Buried treasure in a public repository: Mining mitochondrial genes of 32 annelid species from sequence reads deposited in the Sequence Read Archive (SRA).公共存储库中的埋藏宝藏:从序列读取中挖掘 32 种环节动物的线粒体基因,这些序列读取存储在序列读取档案 (SRA) 中。
PeerJ. 2023 Nov 29;11:e16446. doi: 10.7717/peerj.16446. eCollection 2023.
2
First report of the mitogenome of the invasive reef-building polychaete Ficopomatus enigmaticus (Annelida: Serpulidae) and a cryptic lineage from the Japanese Archipelago.第一份关于入侵性造礁多毛类动物 Ficopomatus enigmaticus(环节动物:盘管虫科)的线粒体基因组的报告,以及来自日本群岛的一个隐生谱系。
Mol Biol Rep. 2023 Sep;50(9):7183-7196. doi: 10.1007/s11033-023-08647-3. Epub 2023 Jul 6.
3

本文引用的文献

1
Mitogenome of a stink worm (Annelida: Travisiidae) includes degenerate group II intron that is also found in five congeneric species.一个臭虫(环节动物:Travisiidae)的线粒体基因组包含退化的组 II 内含子,该内含子也存在于五个同种物种中。
Sci Rep. 2022 Mar 15;12(1):4449. doi: 10.1038/s41598-022-08103-5.
2
Mitochondrial genome of (Gmelin, 1791) (Sabellida: Sabellidae).(1791年,格梅林)的线粒体基因组(缨鳃虫目:缨鳃虫科)
Mitochondrial DNA B Resour. 2021 Feb 11;6(2):499-501. doi: 10.1080/23802359.2021.1872431.
3
Another blow to the conserved gene order in Annelida: Evidence from mitochondrial genomes of the calcareous tubeworm genus Hydroides.
Mitochondrial genome of Kinberg, 1866 (Annelida: Hesionidae).
金伯格1866年(环节动物门:海稚虫科)的线粒体基因组。
Mitochondrial DNA B Resour. 2023 Jan 25;8(1):172-176. doi: 10.1080/23802359.2023.2167480. eCollection 2023.
环节动物保守基因排序再遭打击:来自钙质管蠕虫属 Hydroides 线粒体基因组的证据。
Mol Phylogenet Evol. 2021 Jul;160:107124. doi: 10.1016/j.ympev.2021.107124. Epub 2021 Feb 19.
4
The complete mitochondrial genome of the sand bubbler crab Scopimera globosa and its phylogenetic position.圆球股窗蟹的完整线粒体基因组及其系统发育位置。
Genomics. 2021 Jan;113(1 Pt 2):831-839. doi: 10.1016/j.ygeno.2020.10.014. Epub 2020 Oct 20.
5
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes.GetOrganelle:一个快速且通用的工具包,可用于准确从头组装细胞器基因组。
Genome Biol. 2020 Sep 10;21(1):241. doi: 10.1186/s13059-020-02154-5.
6
Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes.提高后生动物线粒体基因组中编码蛋白基因边界的注释。
Nucleic Acids Res. 2019 Nov 18;47(20):10543-10552. doi: 10.1093/nar/gkz833.
7
TreeShrink: fast and accurate detection of outlier long branches in collections of phylogenetic trees.TreeShrink:快速准确地检测系统发育树集合中的异常长分支。
BMC Genomics. 2018 May 8;19(Suppl 5):272. doi: 10.1186/s12864-018-4620-2.
8
Multiple introns in a deep-sea Annelid (Decemunciger: Ampharetidae) mitochondrial genome.深海环节动物(八腕目:八腕科)线粒体基因组中的多个内含子。
Sci Rep. 2017 Jun 27;7(1):4295. doi: 10.1038/s41598-017-04094-w.
9
ModelFinder: fast model selection for accurate phylogenetic estimates.ModelFinder:用于准确系统发育估计的快速模型选择
Nat Methods. 2017 Jun;14(6):587-589. doi: 10.1038/nmeth.4285. Epub 2017 May 8.
10
SeqKit: A Cross-Platform and Ultrafast Toolkit for FASTA/Q File Manipulation.SeqKit:一个用于FASTA/Q文件操作的跨平台超快速工具包。
PLoS One. 2016 Oct 5;11(10):e0163962. doi: 10.1371/journal.pone.0163962. eCollection 2016.