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取代 DHP 衍生物的合成、分子对接和广泛的构效关系:一类新型除草剂。

Synthesis, molecular docking and extensive structure activity relationship of substituted DHP derivatives: a new class of herbicides.

机构信息

Department of Applied Sciences, KIET Group of Institutions, Delhi-NCR, Ghaziabad, India.

Department of Chemistry, G.B.Pant University of Agriculture and Technology, Pantnagar, India.

出版信息

J Environ Sci Health B. 2022;57(5):379-420. doi: 10.1080/03601234.2022.2062188. Epub 2022 Apr 10.

Abstract

In the present study, twenty-two derivatives of dihydropyridine (DHP) have been synthesized using the Boric acid catalyst in solventless conditions. The synthesis was confirmed by FTIR analysis, 1HNMR, and 13CNMR analysis. The quantitative structure-activity relationship for all the synthesized derivatives was performed using an artificial neural network with correlation coefficient (R) 0.8611, mean standard error 0.19, and Comparative molecular field analysis (CoMFA) with correlation coefficient (R) 0.713, mean standard error 0.27. The molecular docking activity of synthesized compounds was tested using "AUTODOCK VINA" against "Acetohydroxyacid synthase protein receptors (PDB code 1YHZ)" acquired from the "RCSB Protein Data Bank". Docking experiments demonstrated favorable interaction among synthesized DHP derivatives and protein receptors with significant binding energy values. These synthesized derivatives have been screened for their pre-emergence herbicidal bioassay against weed species , and the IC50 value were calculated and activity was compared with Butachlor, significant activity was exhibited by all the derivatives. All the synthesized compounds were also screened for their post emergence herbicidal activity against , and the activity of DHPs were compared with penoxulum. All the synthesized compounds show good to moderate activity. Thus, it is concluded that substituted DHP derivatives may be developed as potential herbicides.

摘要

在本研究中,使用硼酸催化剂在无溶剂条件下合成了二十二种二氢吡啶(DHP)衍生物。通过傅里叶变换红外(FTIR)分析、1HNMR 和 13CNMR 分析证实了合成。使用人工神经网络对所有合成衍生物进行了定量构效关系研究,相关系数(R)为 0.8611,平均标准误差为 0.19,比较分子场分析(CoMFA)的相关系数(R)为 0.713,平均标准误差为 0.27。使用“AUTODOCK VINA”对从“RCSB 蛋白质数据银行”获得的“乙酰羟酸合酶蛋白受体(PDB 代码 1YHZ)”进行了合成化合物的分子对接活性测试。对接实验表明,合成的 DHP 衍生物与蛋白质受体之间存在有利的相互作用,具有显著的结合能值。对这些合成衍生物进行了芽前除草生物测定筛选,计算了 IC50 值,并与丁草胺进行了活性比较,所有衍生物均表现出显著的活性。还对所有合成化合物进行了芽后除草活性筛选,并将 DHP 的活性与吡氟禾草灵进行了比较。所有合成的化合物都表现出良好到中等的活性。因此,结论是取代的 DHP 衍生物可能被开发为潜在的除草剂。

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