Matas Julia, Kohrn Brendan, Fredrickson Jeanne, Carter Kelly, Yu Ming, Wang Ting, Gui Xianyong, Soussi Thierry, Moreno Victor, Grady William M, Peinado Miguel A, Risques Rosa Ana
Department of Laboratory Medicine and Pathology, University of Washington, Seattle, Washington.
Institut Germans Trias i Pujol, Badalona, Spain.
Cancer Res. 2022 Apr 15;82(8):1492-1502. doi: 10.1158/0008-5472.CAN-21-3607.
Although somatic mutations in colorectal cancer are well characterized, little is known about the accumulation of cancer mutations in the normal colon before cancer. Here, we have developed and applied an ultrasensitive, single-molecule mutational test based on CRISPR-DS technology, which enables mutation detection at extremely low frequency (<0.001) in normal colon from patients with and without colorectal cancer. This testing platform revealed that normal colon from patients with and without colorectal cancer carries mutations in common colorectal cancer genes, but these mutations are more abundant in patients with cancer. Oncogenic KRAS mutations were observed in the normal colon of about one third of patients with colorectal cancer but in none of the patients without colorectal cancer. Patients with colorectal cancer also carried more TP53 mutations than patients without cancer and these mutations were more pathogenic and formed larger clones, especially in patients with early-onset colorectal cancer. Most mutations in the normal colon were different from the driver mutations in tumors, suggesting that the occurrence of independent clones with pathogenic KRAS and TP53 mutations is a common event in the colon of individuals who develop colorectal cancer. These results indicate that somatic evolution contributes to clonal expansions in the normal colon and that this process is enhanced in individuals with cancer, particularly in those with early-onset colorectal cancer.
This work suggests prevalent somatic evolution in the normal colon of patients with colorectal cancer, highlighting the potential of using ultrasensitive gene sequencing to predict disease risk.
虽然结直肠癌中的体细胞突变已得到充分表征,但对于癌症发生前正常结肠中癌症突变的积累情况却知之甚少。在此,我们开发并应用了一种基于CRISPR-DS技术的超灵敏单分子突变检测方法,该方法能够在患有和未患结直肠癌患者的正常结肠中检测到极低频率(<0.001)的突变。这个检测平台显示,患有和未患结直肠癌患者的正常结肠中都携带常见结直肠癌基因的突变,但这些突变在癌症患者中更为丰富。在约三分之一的结直肠癌患者的正常结肠中观察到致癌性KRAS突变,而在未患结直肠癌的患者中未观察到。结直肠癌患者也比未患癌症的患者携带更多的TP53突变,并且这些突变更具致病性,形成的克隆更大,尤其是在早发性结直肠癌患者中。正常结肠中的大多数突变与肿瘤中的驱动突变不同,这表明具有致癌性KRAS和TP53突变的独立克隆的出现是结直肠癌患者结肠中的常见事件。这些结果表明,体细胞进化促成了正常结肠中的克隆扩张,并且在癌症患者中这一过程会增强,尤其是在早发性结直肠癌患者中。
这项研究表明结直肠癌患者的正常结肠中普遍存在体细胞进化,突出了使用超灵敏基因测序预测疾病风险的潜力。