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ParD Antitoxin Hotspot Alters a Disorder-to-Order Transition upon Binding to Its Cognate ParE Toxin, Lessening Its Interaction Affinity and Increasing Its Protease Degradation Kinetics.ParD 抗毒素热点与同源 ParE 毒素结合时会改变从无序到有序的转变,从而降低其相互作用亲和力并增加其蛋白酶降解动力学。
Biochemistry. 2022 Jan 4;61(1):34-45. doi: 10.1021/acs.biochem.1c00584. Epub 2021 Dec 16.
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Highly accurate protein structure prediction with AlphaFold.利用 AlphaFold 进行高精度蛋白质结构预测。
Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15.
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Insulin-like growth factors: Ligands, binding proteins, and receptors.胰岛素样生长因子:配体、结合蛋白和受体。
Mol Metab. 2021 Oct;52:101245. doi: 10.1016/j.molmet.2021.101245. Epub 2021 May 4.
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Novel Regulators of the IGF System in Cancer.癌症中 IGF 系统的新型调节因子
Biomolecules. 2021 Feb 12;11(2):273. doi: 10.3390/biom11020273.
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The Amazing World of IDPs in Human Diseases.《人类疾病中流离失所者的神奇世界》。
Biomolecules. 2021 Feb 23;11(2):333. doi: 10.3390/biom11020333.
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IGFBP2 in cancer: Pathological role and clinical significance (Review).IGFBP2 在癌症中的作用:病理作用和临床意义(综述)。
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IGF 依赖性的人 IGFBP2 无规卷曲连接域中天冬氨酸蛋白酶酶切位点的动态调节。

IGF-dependent dynamic modulation of a protease cleavage site in the intrinsically disordered linker domain of human IGFBP2.

机构信息

NMR Research Centre, Indian Institute of Science, Bangalore, Karnataka, India.

Nanobiophysics Lab, Raman Research Institute, Sadashivnagar, Bangalore, Karnataka, India.

出版信息

Proteins. 2022 Sep;90(9):1732-1743. doi: 10.1002/prot.26350. Epub 2022 Apr 30.

DOI:10.1002/prot.26350
PMID:35443068
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9357107/
Abstract

Functional regulation via conformational dynamics is well known in structured proteins but less well characterized in intrinsically disordered proteins and their complexes. Using NMR spectroscopy, we have identified a dynamic regulatory mechanism in the human insulin-like growth factor (IGF) system involving the central, intrinsically disordered linker domain of human IGF-binding protein-2 (hIGFBP2). The bioavailability of IGFs is regulated by the proteolysis of IGF-binding proteins. In the case of hIGFBP2, the linker domain (L-hIGFBP2) retains its intrinsic disorder upon binding IGF-1, but its dynamics are significantly altered, both in the IGF binding region and distantly located protease cleavage sites. The increase in flexibility of the linker domain upon IGF-1 binding may explain the IGF-dependent modulation of proteolysis of IGFBP2 in this domain. As IGF homeostasis is important for cell growth and function, and its dysregulation is a key contributor to several cancers, our findings open up new avenues for the design of IGFBP analogs inhibiting IGF-dependent tumors.

摘要

功能调节通过构象动力学在结构蛋白中是众所周知的,但在固有无序蛋白及其复合物中则不太为人所知。使用 NMR 光谱学,我们已经在涉及人胰岛素样生长因子 (IGF) 结合蛋白-2(hIGFBP-2)的中心固有无序连接域的人胰岛素样生长因子 (IGF) 系统中鉴定出一种动态调节机制。IGFs 的生物利用度受 IGF 结合蛋白的蛋白水解调节。就 hIGFBP-2 而言,连接域 (L-hIGFBP-2) 在结合 IGF-1 时保持其固有无序性,但在 IGF 结合区域和远处的蛋白酶切割位点处,其动力学都发生了显著改变。连接域在 IGF-1 结合时的柔韧性增加可能解释了 IGFBP-2 在该区域的 IGF 依赖性蛋白水解调节。由于 IGF 动态平衡对于细胞生长和功能很重要,并且其失调是几种癌症的关键因素,因此我们的发现为设计抑制 IGF 依赖性肿瘤的 IGFBP 类似物开辟了新途径。