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激进的癌症可以通过其染色质的“激进性”来识别吗?

Can aggressive cancers be identified by the "aggressiveness" of their chromatin?

机构信息

Department of Cell Stress Biology, Roswell Park Comprehensive Cancer Center, Buffalo, New York, USA.

出版信息

Bioessays. 2022 Jul;44(7):e2100212. doi: 10.1002/bies.202100212. Epub 2022 Apr 22.

Abstract

Phenotypic plasticity is a crucial feature of aggressive cancer, providing the means for cancer progression. Stochastic changes in tumor cell transcriptional programs increase the chances of survival under any condition. I hypothesize that unstable chromatin permits stochastic transitions between transcriptional programs in aggressive cancers and supports non-genetic heterogeneity of tumor cells as a basis for their adaptability. I present a mechanistic model for unstable chromatin which includes destabilized nucleosomes, mobile chromatin fibers and random enhancer-promoter contacts, resulting in stochastic transcription. I suggest potential markers for "unsettled" chromatin in tumors associated with poor prognosis. Although many of the characteristics of unstable chromatin have been described, they were mostly used to explain changes in the transcription of individual genes. I discuss approaches to evaluate the role of unstable chromatin in non-genetic tumor cell heterogeneity and suggest using the degree of chromatin instability and transcriptional noise in tumor cells to predict cancer aggressiveness.

摘要

表型可塑性是侵袭性癌症的一个关键特征,为癌症进展提供了手段。肿瘤细胞转录程序的随机变化增加了在任何条件下生存的机会。我假设不稳定的染色质允许侵袭性癌症中转录程序的随机转换,并支持肿瘤细胞的非遗传异质性作为其适应性的基础。我提出了一个不稳定染色质的机制模型,其中包括不稳定的核小体、移动的染色质纤维和随机的增强子-启动子接触,从而导致随机转录。我提出了肿瘤中与预后不良相关的“不稳定”染色质的潜在标志物。尽管不稳定染色质的许多特征已经被描述过,但它们主要用于解释单个基因转录的变化。我讨论了评估不稳定染色质在非遗传肿瘤细胞异质性中的作用的方法,并建议使用肿瘤细胞中染色质不稳定性和转录噪声的程度来预测癌症的侵袭性。

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