College of Biosciences and Biotechnology, Hunan Agricultural University, Changsha, 410128, China.
Sci Rep. 2022 Apr 26;12(1):6782. doi: 10.1038/s41598-022-10817-5.
Leaves and flowers of Amorphophallus konjac do not develop simultaneously thus unique features can be elucidated through study of flowering transformation in A. konjac. In this study, transcriptome libraries of A. konjac leaf buds (LB) and flower buds (FB) were constructed followed by high-throughput sequencing. A total of 68,906 unigenes with an average length of 920 bp were obtained after library assembly. Out of these genes, 24,622 unigenes had annotation information. A total of 6859 differentially expressed genes (DEGs) were identified through differential expression analysis using LB as control. Notably, 2415 DEGs were upregulated whereas 4444 DEGs were downregulated in the two transcriptomes. Go and KEGG analysis showed that the DEGs belonged to 44 functional categories and were implicated in 98 metabolic pathways and 38 DEGs involved in plant hormone signal transduction. Several genes were mined that may be involved in A. konjac flower bud differentiation and flower organ development. Eight DEGs were selected for verification of RNA-seq results using qRT-PCR analysis. Two FLOWERING LOCUS T (FT) genes named AkFT1 and AkFT2 were identified though homologous analysis may be the florigen gene implicated in modulation of A. konjac flowering. These genes were significantly upregulated in flower buds compared with the expression levels on leaf buds. Overexpression of AkFT genes though heterologous expression in Arabidopsis showed that the transgenics flowered at a very early stage relative to wild type plants. These findings indicate that AkFT1 and AkFT2 function as regulation genes in A. konjac flowering development and the two genes may present similar functions during flowering transition.
魔芋的叶片和花朵并非同时发育,因此通过研究魔芋的开花转变,可以阐明其独特的特征。在本研究中,构建了魔芋叶芽(LB)和花芽(FB)的转录组文库,随后进行了高通量测序。文库组装后共获得 68906 条平均长度为 920bp 的 unigenes。在这些基因中,有 24622 条 unigenes具有注释信息。通过以 LB 为对照的差异表达分析,共鉴定出 6859 个差异表达基因(DEGs)。值得注意的是,两个转录本中有 2415 个 DEGs 上调,4444 个 DEGs 下调。GO 和 KEGG 分析表明,这些 DEGs 属于 44 个功能类别,涉及 98 个代谢途径和 38 个参与植物激素信号转导的 DEGs。挖掘出一些可能参与魔芋花芽分化和花器官发育的基因。选择了 8 个 DEGs 通过 qRT-PCR 分析进行 RNA-seq 结果验证。通过同源分析鉴定出两个 FLOWERING LOCUS T(FT)基因,分别命名为 AkFT1 和 AkFT2,它们可能是调节魔芋开花的成花素基因。与叶芽的表达水平相比,这些基因在花芽中显著上调。通过异源表达在拟南芥中过表达 AkFT 基因表明,转基因植物比野生型植物更早开花。这些发现表明,AkFT1 和 AkFT2 作为魔芋开花发育的调控基因发挥作用,这两个基因在开花转变过程中可能具有相似的功能。