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用于溶液中计算光谱学的广义浮动电荷模型的开发、验证及初步应用

Development, Validation, and Pilot Application of a Generalized Fluctuating Charge Model for Computational Spectroscopy in Solution.

作者信息

Barone Vincenzo, Carnimeo Ivan, Mancini Giordano, Pagliai Marco

机构信息

Scuola Normale Superiore, Piazza dei Cavalieri 7, 56126 Pisa, Italy.

Scuola Internazionale Superiore di Studi Avanzati, via Bonomea 265, 34136 Trieste, Italy.

出版信息

ACS Omega. 2022 Apr 6;7(15):13382-13394. doi: 10.1021/acsomega.2c01110. eCollection 2022 Apr 19.

Abstract

A general approach enforcing nonperiodic boundary conditions for the computation of spectroscopic properties in solution has been improved including an effective description of charge-transfer contributions and coordination number adjustment for explicit solvent molecules. Both contributions are obtained from a continuous description of intermolecular hydrogen bonds, which has been employed also for an effective clustering of molecular dynamics trajectories. Fine tuning of the model has been performed for several water clusters, and then its efficiency and reliability have been demonstrated by computing the absorption spectra of different creatinine tautomers in aqueous solution.

摘要

一种用于计算溶液中光谱性质的强制非周期性边界条件的通用方法得到了改进,包括对电荷转移贡献的有效描述以及对明确溶剂分子的配位数调整。这两种贡献均来自分子间氢键的连续描述,该描述也已用于分子动力学轨迹的有效聚类。已对多个水簇进行了模型微调,然后通过计算水溶液中不同肌酐互变异构体的吸收光谱证明了其效率和可靠性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3391/9026056/abd824c12e12/ao2c01110_0001.jpg

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