Department of Biochemistry, Faculty of Pharmaceutical Sciences, Sojo University, 4-22-1 Ikeda, Nishi-ku, Kumamoto 860-0082, Japan.
Department of Protein Structure, Function and Design, Graduate School of Pharmaceutical Sciences, Kyushu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka 812-8582, Japan.
J Biochem. 2022 Jun 28;172(1):49-56. doi: 10.1093/jb/mvac040.
The introduction of intermolecular disulfide bonds by amino acid mutations is an effective method for stabilizing dimeric proteins. X-ray crystal structure of Fab of a therapeutic antibody, adalimumab, revealed the first loop of the CH1 domain to be partially unsolved at position 135-141. To find new sites for the introduction of intermolecular disulfide bonds in adalimumab Fab, Fab mutants targeting the unsolved region were predicted using molecular simulation software. Four Fab mutants, H:K137C-L:I117C, H:K137C-L:F209C, H:S138C-L:F116C and H:S140C-L:S114C, were expressed in the methylotrophic yeast Pichia pastoris. SDS-PAGE analysis of these mutants indicated that H:K137C-L:F209C, H:S138C-L:F116C and H:S140C-L:S114C mutants mostly formed intermolecular disulfide bonds, whereas some H:K137C-L:I117C mutants formed intermolecular disulfide bonds and some did not. Differential scanning calorimetry measurements showed increased thermal stability in all Fab mutants with engineered disulfide bonds. The bio-layer interferometry measurements, for binding of the antigen tumor necrotic factor α, indicated that Fab mutants had less antigen-binding activity than wild-type Fab. In particular, the KD value of H:K137C-L:F209C was ~17 times higher than that of wild-type Fab. Thus, we successfully introduced intermolecular disulfide bonds between the first loop region of the CH1 and CL domains and observed that it increases the thermostability of Fab and affects the antigen-binding activity.
引入氨基酸突变形成的分子间二硫键是稳定二聚体蛋白的有效方法。治疗性抗体阿达木单抗的 Fab 段的 X 射线晶体结构显示,CH1 结构域的第一个环在 135-141 位部分未解决。为了在阿达木单抗 Fab 中找到引入分子间二硫键的新位点,使用分子模拟软件预测了针对未解决区域的 Fab 突变体。表达了四个 Fab 突变体,H:K137C-L:I117C、H:K137C-L:F209C、H:S138C-L:F116C 和 H:S140C-L:S114C,在甲基营养酵母毕赤酵母中。这些突变体的 SDS-PAGE 分析表明,H:K137C-L:F209C、H:S138C-L:F116C 和 H:S140C-L:S114C 突变体主要形成分子间二硫键,而一些 H:K137C-L:I117C 突变体形成分子间二硫键,而另一些则没有。差示扫描量热法测量表明,所有具有工程化二硫键的 Fab 突变体的热稳定性都有所提高。生物层干涉测量法测量与抗原肿瘤坏死因子 α 的结合表明,Fab 突变体的抗原结合活性低于野生型 Fab。特别是,H:K137C-L:F209C 的 KD 值比野生型 Fab 高约 17 倍。因此,我们成功地在 CH1 和 CL 结构域的第一个环区域之间引入了分子间二硫键,并观察到它增加了 Fab 的热稳定性并影响了抗原结合活性。