Zhao Yang, Chen Pu, Lv Hong-Jun, Wu Yuan, Liu Shu, Deng Xueyang, Shi Bingyin, Fu Jiao
Department of Endocrinology, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, China.
Genet Test Mol Biomarkers. 2022 Apr;26(4):159-173. doi: 10.1089/gtmb.2021.0123.
Low selenium levels are associated with an increased incidence and advanced stage of thyroid cancers (THCAs). In response to changes in selenium levels, a hierarchy of selenoprotein biosynthesis allows tissue-specific fine-tuning of the 25 selenoproteins. To determine the role of individual selenoproteins on thyroid carcinogenesis, we carried out a multiomic data mining study. The expression levels of individual selenoproteins and their correlations with prognosis in THCAs were analyzed using Oncomine, GEPIA, and Kaplan-Meier plotter platforms. Co-expression analyses using the cBioportal database were carried out to identify genes that are correlated with selenoproteins. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichments were performed for genes correlated with selenoproteins that were identified as clinically significant. and were significantly downregulated in THCAs and were associated with poor prognoses. Biological processes including negative regulation of growth and angiogenesis were enriched in -positively and -negatively correlated genes, respectively. Many biological processes including negative regulation of growth and MAPK cascade were enriched in -positively and -negatively correlated genes, respectively. The antitumor effects of might be attributed to their protection against endoplasmic reticulum (ER) stress. was revealed to be correlated with ER stress, mitochondrial translation, and telomere maintenance. Biological processes of -correlated genes were enriched in redox processes and ER calcium ion homeostasis. Moreover, cell adhesion and angiogenesis were also shown to be negatively regulated by , providing an antimetastatic effect similar as . This study explored the distinct roles of the 25 selenoproteins in THCA pathogenesis, providing potential oncosuppressing effects of 6 selenoproteins.
低硒水平与甲状腺癌(THCA)的发病率增加和晚期相关。为响应硒水平的变化,硒蛋白生物合成的层级结构允许对25种硒蛋白进行组织特异性的微调。为了确定个体硒蛋白在甲状腺癌发生中的作用,我们进行了一项多组学数据挖掘研究。使用Oncomine、GEPIA和Kaplan-Meier plotter平台分析了个体硒蛋白的表达水平及其与THCA预后的相关性。使用cBioportal数据库进行共表达分析,以鉴定与硒蛋白相关的基因。对被鉴定为具有临床意义的与硒蛋白相关的基因进行基因本体论(GO)和京都基因与基因组百科全书(KEGG)富集分析。[具体蛋白名称1]和[具体蛋白名称2]在THCA中显著下调,并与不良预后相关。分别在与[具体蛋白名称1]呈正相关和与[具体蛋白名称2]呈负相关的基因中富集了包括生长负调控和血管生成在内的生物学过程。分别在与[具体蛋白名称3]呈正相关和与[具体蛋白名称4]呈负相关的基因中富集了包括生长负调控和丝裂原活化蛋白激酶(MAPK)级联反应在内的许多生物学过程。[具体蛋白名称5]的抗肿瘤作用可能归因于它们对内质网(ER)应激的保护作用。[具体蛋白名称6]被发现与ER应激、线粒体翻译和端粒维持相关。与[具体蛋白名称7]相关的基因的生物学过程在氧化还原过程和ER钙离子稳态中富集。此外,细胞黏附和血管生成也显示受到[具体蛋白名称8]的负调控,提供了与[具体蛋白名称9]类似的抗转移作用。本研究探讨了25种硒蛋白在THCA发病机制中的不同作用,提供了6种硒蛋白的潜在抑癌作用。