Institute of Drug Discovery Technology, Ningbo University, Ningbo 315211, China.
Qian Xuesen Collaborative Research Center of Astrochemistry and Space Life Sciences, Ningbo University, Ningbo 315211, China.
Dalton Trans. 2022 May 17;51(19):7571-7580. doi: 10.1039/d2dt00797e.
Nonheme iron(II)-hydroperoxo species (Fe-(η-OOH)) 1 and the concomitant oxo-iron(IV)-hydroxyl one 2 are proposed as the key intermediates of a large class of 2-oxoglutarate dependent dioxygenases (, isopenicillin synthase). Extensive biomimetic experiments have been exerted to identify which one is the real oxidant and to reveal the structure-function relationship of them, whereas the mechanistic picture is still elusive. To this end, density functional theory (DFT) calculations were performed to systematically study the mechanistic details of ligand self-hydroxylation and competitive substrate oxidation by these two species supported by a tridentate ligand Fe(Tp)(benzilate) (Tp = hydrotris(3,5-diphenylpyrazole-1-yl)borate). The calculated results revealed that the structure and the conversion of the Fe-(η-OOH) complex 1 are obviously different from the ferric Fe-OOH one. The orientation of the Fe-OOH moiety of 1 is side-on, while that of the ferric Fe-OOH species is end-on. The conversion of 1 to the high-valent iron-oxo species is exothermic, while the conversion of the ferric Fe-OOH species to the high-valent species is endothermic. Thus, the sluggish 1 does not act as the oxidant and readily decays to the robust 2. The activation energy of intramolecular ligand self-hydroxylation in 2 is 14.8 kcal mol and intermolecular substrate oxidations (, thioanisole sulfoxidation) with a lower barrier show a strong inhibiting ability toward ligand self-hydroxylation, while those with a higher barrier (, cyclohexane hydroxylation) have no effect. Our theoretical results fit nicely with the experimental observations and will enrich the knowledge of the metal-oxygen intermediate and play a positive role in the rational design of new biomimetic catalysts.
非血红素铁(II)-过氧物种 (Fe-(η-OOH)) 1 和伴随的氧代铁(IV)-羟物种 2 被提议为一大类 2-氧代戊二酸依赖性双加氧酶(如青霉素 G 合成酶)的关键中间体。已经进行了广泛的仿生实验,以确定哪一种是真正的氧化剂,并揭示它们的结构-功能关系,然而,其机制仍然难以捉摸。为此,进行了密度泛函理论 (DFT) 计算,以系统研究由三齿配体 Fe(Tp)(苯甲酸盐)(Tp = 三(3,5-二苯基吡唑-1-基)硼酸)支持的这两种物种的配体自氧化和亲核底物氧化的反应机理细节。计算结果表明,1 的 Fe-(η-OOH) 配合物的结构和转化明显不同于铁(III)-OOH 物种。1 的 Fe-OOH 部分的取向是侧式,而铁(III)-OOH 物种的取向是端式。1 向高价铁-氧物种的转化是放热的,而铁(III)-OOH 物种向高价物种的转化是吸热的。因此,缓慢的 1 不会充当氧化剂,并且容易分解为稳定的 2。2 中分子内配体自氧化的活化能为 14.8 kcal/mol,并且具有较低势垒的亲核底物氧化(如硫代茴香醚氧化)显示出对配体自氧化的强抑制能力,而具有较高势垒的底物(如环己烷羟化)则没有影响。我们的理论结果与实验观察结果非常吻合,并将丰富金属-氧中间体的知识,并在合理设计新型仿生催化剂方面发挥积极作用。