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木质利用昆虫幼虫碳氮代谢相关共生细菌的潜在网络结构。

A potential network structure of symbiotic bacteria involved in carbon and nitrogen metabolism of wood-utilizing insect larvae.

机构信息

Graduate School of Horticulture, Chiba University, Matsudo, Chiba 271-8501, Japan; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Sermas Co., Ltd., Ichikawa, Chiba 272-0033, Japan; Japan Eco-science (Nikkan Kagaku) Co., Ltd., Chiba, Chiba 260-0034, Japan.

Graduate School of Horticulture, Chiba University, Matsudo, Chiba 271-8501, Japan.

出版信息

Sci Total Environ. 2022 Aug 25;836:155520. doi: 10.1016/j.scitotenv.2022.155520. Epub 2022 May 1.

Abstract

Effective biological utilization of wood biomass is necessary worldwide. Since several insect larvae can use wood biomass as a nutrient source, studies on their digestive microbial structures are expected to reveal a novel rule underlying wood biomass processing. Here, structural inferences for inhabitant bacteria involved in carbon and nitrogen metabolism for beetle larvae, an insect model, were performed to explore the potential rules. Bacterial analysis of larval feces showed enrichment of the phyla Chroloflexi, Gemmatimonadetes, and Planctomycetes, and the genera Bradyrhizobium, Chonella, Corallococcus, Gemmata, Hyphomicrobium, Lutibacterium, Paenibacillus, and Rhodoplanes, as bacteria potential involved in plant growth promotion, nitrogen cycle modulation, and/or environmental protection. The fecal abundances of these bacteria were not necessarily positively correlated with their abundances in the habitat, indicating that they were selectively enriched in the feces of the larvae. Correlation and association analyses predicted that common fecal bacteria might affect carbon and nitrogen metabolism. Based on these hypotheses, structural equation modeling (SEM) statistically estimated that inhabitant bacterial groups involved in carbon and nitrogen metabolism were composed of the phylum Gemmatimonadetes and Planctomycetes, and the genera Bradyrhizobium, Corallococcus, Gemmata, and Paenibacillus, which were among the fecal-enriched bacteria. Nevertheless, the selected common bacteria, i.e., the phyla Acidobacteria, Armatimonadetes, and Bacteroidetes and the genera Candidatus Solibacter, Devosia, Fimbriimonas, Gemmatimonas Opitutus, Sphingobium, and Methanobacterium, were necessary to obtain good fit indices in the SEM. In addition, the composition of the bacterial groups differed depending upon metabolic targets, carbon and nitrogen, and their stable isotopes, δC and δN, respectively. Thus, the statistically derived causal structural models highlighted that the larval fecal-enriched bacteria and common symbiotic bacteria might selectively play a role in wood biomass carbon and nitrogen metabolism. This information could confer a new perspective that helps us use wood biomass more efficiently and might stimulate innovation in environmental industries in the future.

摘要

有效利用木质生物质是全世界的需要。由于几种昆虫幼虫可以将木质生物质作为营养源,因此研究它们的消化微生物结构有望揭示木质生物质处理的新规律。在这里,我们对作为昆虫模型的甲虫幼虫的参与碳和氮代谢的栖息细菌进行了结构推断,以探索潜在的规律。幼虫粪便中的细菌分析显示,厚壁菌门、芽单胞菌门和浮霉菌门以及Bradyrhizobium、Chonella、Corallococcus、Gemmata、Hyphomicrobium、Lutibacterium、Paenibacillus 和 Rhodoplanes 等属的细菌富集,这些细菌可能参与植物生长促进、氮循环调节和/或环境保护。这些细菌的粪便丰度与它们在栖息地中的丰度不一定呈正相关,表明它们在幼虫粪便中被选择性富集。相关性和关联分析预测,常见的粪便细菌可能会影响碳和氮代谢。基于这些假设,结构方程模型(SEM)统计估计,参与碳和氮代谢的栖息细菌群由芽单胞菌门和浮霉菌门以及 Bradyrhizobium、Corallococcus、Gemmata 和 Paenibacillus 等属组成,这些属是粪便中富集的细菌。然而,选择的常见细菌,即酸杆菌门、Armatimonadetes 门和拟杆菌门以及 Candidatus Solibacter、Devosia、Fimbriimonas、Gemmatinonas Opitutus、Sphingobium 和 Methanobacterium 属,对于在 SEM 中获得良好的拟合指数是必要的。此外,细菌群的组成取决于代谢目标、碳和氮以及它们的稳定同位素 δC 和 δN。因此,统计得出的因果结构模型强调了幼虫粪便中富集的细菌和常见的共生细菌可能选择性地在木质生物质的碳和氮代谢中发挥作用。这一信息为我们更有效地利用木质生物质提供了新的视角,并可能在未来刺激环境产业的创新。

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