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一种“CNN”基序与砷酸盐和亚砷酸盐的相互作用图谱:一种潜在的基于肽的砷清除剂。

Interaction landscape of a 'CNN' motif with arsenate and arsenite: a potential peptide-based scavenger of arsenic.

作者信息

Sahu Subhankar, Sheet Tridip, Banerjee Raja

机构信息

Department of Biotechnology and Head Department of Bioinformatics, Maulana Abul Kalam Azad University of Technology, West Bengal (Formerly Known as West Bengal University of Technology) BF-142, Salt Lake Kolkata 700064 West Bengal India

出版信息

RSC Adv. 2019 Jan 9;9(2):1062-1074. doi: 10.1039/c8ra08225a. eCollection 2019 Jan 2.

Abstract

Arsenic (As) is a toxic metalloid that has drawn immense attention from the scientific community recently due to its fatal effects through its unwanted occurrence in ground water around the globe. The presence of an excess amount of water soluble arsenate and/or arsenite salt (permissible limit 10 μg L as recommended by the WHO) in water has been correlated with several human diseases. Although arsenate (HAsO ) is a molecular analogue of phosphate (HPO ), phosphate is indispensable for life, while arsenic and its salts are toxic. Therefore, it is worthwhile to focus on the removal of arsenic from water. Towards this end, the design of peptide-based scaffolds for the recognition of arsenate and arsenite would add a new dimension. Utilizing the stereochemical similarity between arsenate (HAsO ) and phosphate (HPO ), we successfully investigated the recognition of arsenate and arsenite with a naturally occurring novel phosphate binding 'CNN' motif and its related designed analogues. Using computational as well as biophysical approaches, for the first time, we report here that a designed peptide-based scaffold based on the 'CNN' motif can recognize anions of arsenic in a thermodynamically favorable manner in a context-free system. This peptide-based arsenic binding agent has the potential for future development as a scavenger of arsenic anions to obtain arsenic free water.

摘要

砷(As)是一种有毒类金属,由于其在全球地下水的意外出现会产生致命影响,最近引起了科学界的广泛关注。水中过量的水溶性砷酸盐和/或亚砷酸盐(世界卫生组织建议的允许限量为10μg/L)与多种人类疾病相关。虽然砷酸盐(HAsO)是磷酸盐(HPO)的分子类似物,但磷酸盐对生命至关重要,而砷及其盐类是有毒的。因此,关注从水中去除砷是值得的。为此,设计用于识别砷酸盐和亚砷酸盐的肽基支架将增添新的维度。利用砷酸盐(HAsO)和磷酸盐(HPO)之间的立体化学相似性,我们成功地研究了天然存在的新型磷酸盐结合“CNN”基序及其相关设计类似物对砷酸盐和亚砷酸盐的识别。首次使用计算和生物物理方法,我们在此报告基于“CNN”基序设计的肽基支架可以在无背景系统中以热力学有利的方式识别砷阴离子。这种基于肽的砷结合剂有潜力在未来作为砷阴离子清除剂进行开发,以获得无砷水。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e867/9059529/743cb10a5c72/c8ra08225a-f1.jpg

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