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关于[Cu O ]侧过氧-/双μ-氧平衡的综合理论观点。

Comprehensive Theoretical View of the [Cu O ] Side-on-Peroxo-/Bis-μ-Oxo Equilibria.

机构信息

Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Flemingovo náměstí 2, 166 10, Praha 6, Czech Republic.

Faculty of Science, Charles University, Albertov 2038/6, Prague 2, 128 43, Czech Republic.

出版信息

Chemphyschem. 2022 Jul 19;23(14):e202200076. doi: 10.1002/cphc.202200076. Epub 2022 May 24.

Abstract

Coupled binuclear copper (CBC) sites are employed by many metalloenzymes to catalyze a broad set of biochemical transformations. Typically, the CBC catalytic sites are activated by the O molecule to form various [Cu O ] reactive species. This has also inspired synthesis and development of various biomimetic inorganic complexes featuring the CBC core. From theoretical perspective, the [Cu O ] reactivity often hinges on the side-on-peroxo-dicopper(II) (P) vs. bis-μ-oxo-dicopper(III) (O) isomerism - an equilibrium that has become almost iconic in theoretical bioinorganic chemistry. Herein, we present a comprehensive calibration and evaluation of the performance of various composite computational protocols available in contemporary computational chemistry, involving coupled-cluster and multireference (relativistic) wave function methods, popular density functionals and solvation models. Starting with the well-studied reference [Cu O (NH ) ] system, we compared the performance of electronic structure methods and discussed the relativistic effects. This allowed us to select several 'calibrated' DFT functionals that can be conveniently employed to study ten experimentally well-characterized [Cu O ] inorganic systems. We mostly predicted the lowest-energy structures (P vs. O) of the studied systems correctly. In addition, we present calibration of the used electronic structure methods for prediction of the spectroscopic features of the [Cu O ] core, mostly provided by the resonance Raman (rR) spectroscopy.

摘要

双核铜 (CBC) 配合物被许多金属酶用于催化广泛的生化转化。通常,CBC 催化位点被 O 分子激活,形成各种 [Cu-O] 反应性物种。这也激发了各种具有 CBC 核心的仿生无机配合物的合成和发展。从理论角度来看,[Cu-O] 的反应性通常取决于侧过氧双核铜(II) (P) 与双μ-氧双核铜(III) (O) 异构体的平衡——这种平衡在理论生物无机化学中几乎已成标志性概念。在此,我们全面校准和评估了当代计算化学中各种可用的复合计算方案的性能,包括耦合簇和多参考(相对论)波函数方法、流行的密度泛函和溶剂化模型。从研究充分的参考 [Cu-O(NH 3 )] 体系开始,我们比较了电子结构方法的性能并讨论了相对论效应。这使我们能够选择几种“校准”的 DFT 泛函,这些泛函可方便地用于研究十个经过实验充分表征的 [Cu-O] 无机体系。我们主要正确预测了研究体系的最低能量结构(P 与 O)。此外,我们还对用于预测 [Cu-O] 核心光谱特征的电子结构方法进行了校准,这些特征主要由共振拉曼 (rR) 光谱提供。

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