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关于星际介质中甘氨酸开壳层气相化学可能形成的计算研究。

Computational studies on the possible formation of glycine open shell gas-phase chemistry in the interstellar medium.

作者信息

Thripati Sorakayala

机构信息

Department of Chemistry, Indian Institute of Science Education and Research Tirupati, Andhra Pradesh - 517507, India.

出版信息

Org Biomol Chem. 2022 May 26;20(20):4189-4203. doi: 10.1039/d2ob00407k.

Abstract

Glycine is the simplest proteinogenic amino acid. It has significant astrobiological implications owing to the ongoing investigation for its detection in the interstellar medium (ISM). Hence, a suitable mechanistic elucidation for its formation in the ISM is of current research interest. In the present work, by employing electronic structure calculations [UCCSD(T) and density functional theory (DFT)], various plausible chemical pathways in the gas phase have been examined for the formation of glycine (whose existence has been indirectly proposed in the ISM) and other simple amino acids (yet to be detected in the ISM) from some simpler molecules present in the ISM. This work suggests that step 1: HO-CO (radical) + CHNH → NHCHCOOH (radical) and step 2a: NHCHCOOH (radical) + H → glycine + H (radical) have very small barriers of 0.14 kcal mol and ∼3 kcal mol, respectively (easily surmountable at a temperature of ∼50 K under putative interstellar conditions). Hence this should likely be feasible in interstellar gas-phase chemistry. Therefore, HO-CO (radical), CHNH, and H could be the possible precursors for the formation of glycine (subject to the presence of the HO-CO radical). The energetic information related to the interstellar reactions, and how this work takes the putative interstellar conditions into account are presented. This paper also highlights how a reaction found to be unsuitable for interstellar molecular evolution surface chemistry could nonetheless occur gas-phase chemistry. Based on our results, this work also recommends detecting three new open-shell molecules, HO-CO radical, NHCHCOOH radical, and NHCHCOOH radical, in the ISM.

摘要

甘氨酸是最简单的蛋白质原氨基酸。由于正在对其在星际介质(ISM)中的检测进行研究,它具有重要的天体生物学意义。因此,对其在星际介质中形成的合适机理阐释是当前的研究热点。在本工作中,通过采用电子结构计算[UCCSD(T)和密度泛函理论(DFT)]方法,研究了气相中从星际介质中存在的一些较简单分子形成甘氨酸(其在星际介质中的存在已被间接提出)和其他简单氨基酸(尚未在星际介质中检测到)的各种可能化学途径。这项工作表明,第一步:HO - CO(自由基)+ CHNH → NHCHCOOH(自由基),第二步a:NHCHCOOH(自由基)+ H → 甘氨酸 + H(自由基)的能垒非常小,分别为0.14千卡/摩尔和约3千卡/摩尔(在假定的星际条件下,在约50 K的温度下很容易跨越)。因此,这在星际气相化学中可能是可行的。所以,HO - CO(自由基)、CHNH和H可能是甘氨酸形成的可能前体(前提是存在HO - CO自由基)。本文介绍了与星际反应相关的能量信息,以及这项工作是如何考虑假定的星际条件的。本文还强调了一个被发现不适用于星际分子演化的反应——表面化学反应——如何仍然可以在气相化学中发生。基于我们的结果,这项工作还建议在星际介质中检测三种新的开壳分子,即HO - CO自由基、NHCHCOOH自由基和NHCHCOOH自由基。

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