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在高温高密度星际介质中,由 、HCOOH 和 生成甘氨酸的基元反应。

Elementary reactions for glycine production in hot and dense interstellar media from , HCOOH, and .

作者信息

Pinto César H, Vieira Isabela S, Spada Rene F K

机构信息

Departamento de Física, Instituto Tecnológico de Aeronáutica, São José dos Campos, 12228-900, SP, Brazil.

Laboratório de Computação Científica Avançada e Modelamento (Lab-CCAM), Instituto Tecnológico de Aeronáutica, São José dos Campos, 12228-900, SP, Brazil.

出版信息

J Mol Model. 2024 Dec 16;31(1):21. doi: 10.1007/s00894-024-06241-3.

Abstract

CONTEXT

In this work, we investigate three elementary reactions involved in the production of glycine in the interstellar medium (ISM) employing trustworthy electronic structure and chemical kinetics methodologies. We considered three elementary reactions: ( ), ( ) and ( ) under conditions consistent with hot molecular cores of massive star-forming regions. Our results indicate that the elementary reactions are feasible in these environments, with reaction barriers of 18.8 ( ) and 18.4 ( ). The rate coefficients for these reactions were calculated to be 1.4 and 9.3 at 1000 K. Additionally, if the products of ( ) couple on a singlet surface, connects to the ground state of glycine via a barrierless path presenting a rate coefficient equal to 8.7 at 298.15 K. Given that the molecules involved in these reactions have been detected in regions such as Sgr B2, our findings suggest that these elementary reactions should be included in mechanisms to study the production of glycine in such locations.

METHODS

The single-reference electronic structure calculations were carried out with the ORCA 4.1.2 package while the multi-reference calculations were performed with the COLUMBUS 7.0 package. The DFT functionals employed were M06-2X, B97X, and B97X-D3, with the 6-31+G* and def2-TZVP, and for the wave function-based calculations, the CCSD(T), DLPNO-CCSD(T), MRCI, and CASSF methods were employed using the aug-cc-pVDZ, aug-cc-pVTZ, and aug-cc-pVQZ basis sets. The chemical kinetic calculations for the elementary reactions with well-defined saddle points were performed using the Pilgrim package employing the TST, CVT, and CVT/SCT approaches.

摘要

背景

在这项工作中,我们采用可靠的电子结构和化学动力学方法,研究了星际介质(ISM)中甘氨酸产生过程中涉及的三个基元反应。我们考虑了在与大质量恒星形成区域的热分子核一致的条件下的三个基元反应:( )、( )和( )。我们的结果表明,这些基元反应在这些环境中是可行的,反应势垒分别为18.8( )和18.4( )。这些反应的速率系数在1000 K时计算为1.4 和9.3 。此外,如果( )的产物在单重态表面耦合, 通过无势垒路径连接到甘氨酸的基态,在298.15 K时速率系数等于8.7 。鉴于在诸如人马座B2等区域已检测到这些反应中涉及的分子,我们的发现表明,这些基元反应应纳入研究此类位置甘氨酸产生的机制中。

方法

单参考电子结构计算使用ORCA 4.1.2软件包进行,而多参考计算使用COLUMBUS 7.0软件包进行。所采用的密度泛函理论(DFT)泛函为M06-2X、B97X和B97X-D3,基组为6-31+G*和def2-TZVP,对于基于波函数的计算,使用aug-cc-pVDZ、aug-cc-pVTZ和aug-cc-pVQZ基组采用CCSD(T)、DLPNO-CCSD(T)、MRCI和CASSF方法。使用Pilgrim软件包采用过渡态理论(TST)、变分过渡态理论(CVT)和CVT/小曲率隧道效应(SCT)方法对具有明确鞍点的基元反应进行化学动力学计算。

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