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在MCTFR数据中检测与行为抑制相关变异的亲本来源效应。

Detection of Parent-of-Origin Effects for the Variants Associated With Behavioral Disinhibition in the MCTFR Data.

作者信息

Kong Yi-Fan, Li Meng-Kai, Yuan Yu-Xin, Yang Zi-Ying, Yu Wen-Yi, Zhao Pei-Zhen, Zhou Ji-Yuan

机构信息

Department of Biostatistics, State Key Laboratory of Organ Failure Research, Ministry of Education, and Guangdong Provincial Key Laboratory of Tropical Disease Research, School of Public Health, Southern Medical University, Guangzhou, China.

Guangdong-Hong Hong-Macao Joint Laboratory for Contaminants Exposure and Health, Guangzhou, China.

出版信息

Front Genet. 2022 Apr 26;13:831685. doi: 10.3389/fgene.2022.831685. eCollection 2022.

Abstract

Behavioral disinhibition is one of the important characteristics of many mental diseases. It has been reported in literature that serious behavioral disinhibition will affect people's health and greatly reduce people's quality of life. Meanwhile, behavioral disinhibition can easily lead to illegal drug abuse and violent crimes, etc., which will bring great harm to the society. At present, large-scale genome-wide association analysis has identified many loci associated with behavioral disinhibition. However, these studies have not incorporated the parent-of-origin effects (POE) into analysis, which may ignore or underestimate the genetic effects of loci on behavioral disinhibition. Therefore, in this article, we analyzed the five phenotypes related to behavioral disinhibition in the Minnesota Center for Twin and Family Research data (nicotine, alcohol consumption, alcohol dependence, illicit drugs, and non-substance use related behavioral disinhibition), to further explore the POE of variants on behavioral disinhibition. We applied a linear mixed model to test for the POE at a genome-wide scale on five transformed phenotypes, and found nine SNPs with statistically significant POE at the significance level of 5 × 10. Among them, SNPs rs4141854, rs9394515, and rs4711553 have been reported to be associated with two neurological disorders (restless legs syndrome and Tourette's syndrome) which are related to behavioral disinhibition; SNPs rs12960235 and rs715351 have been found to be associated with head and neck squamous cell carcinoma, skin cancer and type I diabetes, while both SNPs have not been identified to be related to behavioral disinhibition in literature; SNPs rs704833, rs6837925, rs1863548, and rs11067062 are novel loci identified in this article, and their function annotations have not been reported in literature. Follow-up study in molecular genetics is needed to verify whether they are surely related to behavioral disinhibition.

摘要

行为抑制解除是许多精神疾病的重要特征之一。文献报道,严重的行为抑制解除会影响人们的健康,并大大降低人们的生活质量。同时,行为抑制解除很容易导致非法药物滥用和暴力犯罪等,这将给社会带来极大危害。目前,大规模全基因组关联分析已经确定了许多与行为抑制解除相关的基因座。然而,这些研究并未将亲本来源效应(POE)纳入分析,这可能会忽略或低估基因座对行为抑制解除的遗传效应。因此,在本文中,我们分析了明尼苏达双胞胎与家庭研究中心数据中与行为抑制解除相关的五种表型(尼古丁、酒精消费、酒精依赖、非法药物以及与非物质使用相关的行为抑制解除),以进一步探索变异对行为抑制解除的亲本来源效应。我们应用线性混合模型在全基因组范围内对五种转换后的表型进行亲本来源效应测试,发现在5×10的显著性水平下有9个单核苷酸多态性(SNP)具有统计学显著的亲本来源效应。其中,单核苷酸多态性rs4141854、rs9394515和rs4711553已被报道与两种与行为抑制解除相关的神经疾病(不宁腿综合征和图雷特综合征)有关;单核苷酸多态性rs12960235和rs715351已被发现与头颈部鳞状细胞癌、皮肤癌和I型糖尿病有关,而这两个单核苷酸多态性在文献中均未被确定与行为抑制解除有关;单核苷酸多态性rs704833、rs6837925、rs1863548和rs11067062是本文中鉴定出的新基因座,其功能注释在文献中尚未报道。需要进行分子遗传学的后续研究来验证它们是否确实与行为抑制解除有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/79ce/9086303/531e14eff9c6/fgene-13-831685-g001.jpg

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