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星斑川鲽(Platichthys stellatus) septin 基因家族的分子特征和表达分析及重组 septin 2、3 和 8 的吞噬功能。

Molecular characterization and expression analysis of septin gene family and phagocytic function of recombinant septin 2, 3 and 8 of starry flounder (Platichthys stellatus).

机构信息

Department of Marine Biology & Aquaculture, College of Marine Science, Gyeongsang National University, 455, Tongyeong, 650-160, Republic of Korea.

Fish Genetics and Breeding Research Center, National Institute of Fisheries Science, Geoje, 53334, South Korea.

出版信息

Fish Shellfish Immunol. 2022 Jul;126:251-262. doi: 10.1016/j.fsi.2022.05.018. Epub 2022 May 13.

Abstract

Septin is an evolutionarily conserved family of GTP-binding proteins. Septins are known to be involved in a variety of cellular processes, including cell division, chromosome separation, cell polarity, motility, membrane dynamics, exocytosis, apoptosis, phagocytosis, DNA damage responses, and other immune responses. In this study, the sequences of the septin gene family of starry flounder were obtained using NGS sequencing, and the integrity of the sequences was verified through cloning and sequencing. At first, the amino acid sequence was annotated using the cDNA sequence, and then, the gene sequence was verified through multiple sequence alignment and phylogenetic analyses using the related conserved sequences. The septin gene family was classified into three subgroups based on the phylogenetic analysis. High conservation within the domain and homology between the genes reported in different species were confirmed. The expression level of septin gene family mRNA in each tissue of healthy starry flounder was evaluated to confirm the tissue- and gene-specific expression levels. Additionally, as a result of the analysis of mRNA expression after simulated pathogen infection, significant expression changes and characteristics were confirmed upon infection with bacteria (Streptococcus parauberis PH0710) and virus (VHSV). Based on the current results and that of previous studies, to confirm the immunological function, Septin 2, 3, and 8 were produced as recombinant proteins based on the amino acid sequences, and their role in phagocytosis was further investigated. The results of this study indicate that septin gene family plays a complex and crucial role in the host immune response to pathogens of starry flounder.

摘要

Septin 是一个进化上保守的 GTP 结合蛋白家族。已知 septin 参与多种细胞过程,包括细胞分裂、染色体分离、细胞极性、运动性、膜动力学、胞吐作用、细胞凋亡、吞噬作用、DNA 损伤反应和其他免疫反应。在这项研究中,使用 NGS 测序获得了星斑川鲽的 septin 基因家族的序列,并通过克隆和测序验证了序列的完整性。首先,使用 cDNA 序列对氨基酸序列进行注释,然后使用相关保守序列进行多序列比对和系统发育分析来验证基因序列。根据系统发育分析,将 septin 基因家族分为三个亚组。在域内高度保守,并在不同物种报告的基因之间确认了同源性。评估了健康星斑川鲽每个组织中 septin 基因家族 mRNA 的表达水平,以确认组织和基因特异性表达水平。此外,作为模拟病原体感染后 mRNA 表达分析的结果,在感染细菌(副溶血弧菌 PH0710)和病毒(传染性造血器官坏死病毒 VHSV)时,确认了显著的表达变化和特征。基于当前结果和以前的研究结果,为了确认免疫功能,根据氨基酸序列生产了重组蛋白 Septin 2、3 和 8,并进一步研究了它们在吞噬作用中的作用。本研究的结果表明,septin 基因家族在宿主对星斑川鲽病原体的免疫反应中发挥着复杂而关键的作用。

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