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量化物候多样性:基于希尔数理论的框架。

Quantifying phenological diversity: a framework based on Hill numbers theory.

机构信息

Laboratorio de Ecología Evolutiva y Conservación de Anfibios y Reptiles, Facultad de Estudios Superiores Iztacala, Universidad Nacional Autónoma de México, Tlalnepantla de Baz, México, Mexico.

Posgrado en Ciencias Biológicas, Unidad de Posgrado, Circuito de Posgrados, Universidad Nacional Autónoma de México, Ciudad Universitaria, Coyoacán, Ciudad de México, Mexico.

出版信息

PeerJ. 2022 May 12;10:e13412. doi: 10.7717/peerj.13412. eCollection 2022.

Abstract

BACKGROUND

Despite the great concern triggered by the environmental crisis worldwide, the loss of temporal key functions and processes involved in biodiversity maintenance has received little attention. Species are restricted in their life cycles by environmental variables because of their physiological and behavioral properties; thus, the timing and duration of species' presence and their activities vary greatly between species within a community. Despite the ecological relevance of such variation, there is currently no measure that summarizes the key temporal aspects of biological diversity and allows comparisons of community phenological patterns. Here, we propose a measure that synthesizes variability of phenological patterns using the Hill numbers-based attribute diversity framework.

METHODS

We constructed a new phenological diversity measure based on the aforementioned framework through pairwise overlapping distances, which was supplemented with wavelet analysis. The Hill numbers approach was chosen as an adequate way to define a set of diversity values of different order q, a parameter that determines the sensitivity of the diversity measure to abundance. Wavelet transform analysis was used to model continuous variables from incomplete data sets for different phenophases. The new measure, which we call Phenological Hill numbers (PD), considers the decouplings of phenophases through an overlapping area value between pairs of species within the community. PD was first tested through simulations with varying overlap in phenophase magnitude and intensity and varying number of species, and then by using one real data set.

RESULTS

PD maintains the diversity patterns of order q as in any other diversity measure encompassed by the Hill numbers framework. Minimum PD values in the simulated data sets reflect a lack of differentiation in the phenological curves of the community over time; by contrast, the maximum PD values reflected the most diverse simulations in which phenological curves were equally distributed over time. PD values were consistent with the homogeneous distribution of the intensity and concurrence of phenophases over time, both in the simulated and the real data set.

DISCUSSION

PD provides an efficient, readily interpretable and comparable measure that summarizes the variety of phenological patterns observed in ecological communities. PD retains the diversity patterns of order q characteristic of all diversity measures encompassed by the distance-based Hill numbers framework. In addition, wavelet transform analysis proved useful for constructing a continuous phenological curve. This methodological approach to quantify phenological diversity produces simple and intuitive values for the examination of phenological diversity and can be widely applied to any taxon or community's phenological traits.

摘要

背景

尽管全球环境危机引起了极大关注,但生物多样性维持所涉及的时间关键功能和过程的丧失却很少受到关注。由于生理和行为特性,物种的生命周期受到环境变量的限制;因此,物种在一个群落中的存在时间和活动时间在物种之间有很大的差异。尽管这种变化具有生态相关性,但目前还没有一种能够总结生物多样性关键时间方面并允许比较群落物候模式的度量标准。在这里,我们提出了一种使用基于 Hill 数的属性多样性框架综合物候模式可变性的度量标准。

方法

我们通过成对重叠距离构建了一个基于上述框架的新物候多样性度量标准,该标准补充了小波分析。Hill 数方法被选为定义不同阶 q 的一组多样性值的合适方法,其中 q 是决定多样性度量对丰度敏感程度的参数。小波变换分析用于对不同物候阶段的不完全数据集进行连续变量建模。我们称之为物候 Hill 数(PD)的新度量标准,通过考虑社区内物种对之间的重叠区域值来考虑物候阶段的解耦。PD 首先通过模拟不同物相幅度和强度的重叠以及不同物种数量的模拟进行测试,然后使用一个真实数据集进行测试。

结果

PD 保持了任何其他包含在 Hill 数框架中的多样性度量标准的阶 q 的多样性模式。模拟数据集的最小 PD 值反映了随着时间的推移,群落物候曲线缺乏分化;相反,最大 PD 值反映了最具多样性的模拟,其中物候曲线在时间上均匀分布。PD 值与模拟和真实数据集随时间推移的物候阶段强度和同时性的均匀分布一致。

讨论

PD 提供了一种高效、易于解释和可比的度量标准,可总结生态群落中观察到的物候模式的多样性。PD 保留了距离基于 Hill 数框架中包含的所有多样性度量标准的阶 q 的多样性模式。此外,小波变换分析对于构建连续物候曲线非常有用。这种量化物候多样性的方法可以产生简单直观的值,用于检查物候多样性,并可广泛应用于任何分类群或群落的物候特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bfb2/9107786/cea2585a1b82/peerj-10-13412-g001.jpg

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